Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0936 ATGAAAAGAGAGGAAGAATATGGGCAGTGTTCATCAGAAGCCATAAACAACTATCACACCTATCAAGAGCAACTATTTATGCAACAGATGCAGCAACAACAGAACACCATGTTTCCAGAAGTTTCTCCATGGAACATCCCTCCGGTTCACTCCTTCAACCAACCGGTTCAGCATCATCACTTCTCCAATCCGGTTCGAGCCGACAATGACCCGTTTCTTCTTCCTCCACCACCACCTCCTCCTCCCTATGGTGGTTTGTTCAACCGGAGGGTTCCTAATTCTCTCCAATTTGCTTATGATGGTTGCTCACCTTCTGACCATCTTCGGCTCTTATCTGAAGCCCTTGGACCGATGGTTCAACCCGGTTCGGCTCCTTTTGGCCTCCAAGCCGAGTTGGGAAAGATGACGGCTCAAGAAATTATGGATGCTAAGGCTCTTGCTGCTTCTAAGAGTCATAGCGAAGCTGAAAGGAGACGTAGAGAGAGAATCAATAACCATCTTGCCAAGCTTCGTAGCTTATTGCCTAGTACAACCAAAACGGACAAAGCATCATTACTAGCAGAAGTGATCCAACATGTGAAGGAACTGAAGAGGCAAACATCCCTAATAGCAGAAACAAGCCCGGTACCGACTGAGATCGACGAGCTAACAGTGGACACAGCCGATGACGACGAAGACCTCACCGACAACGACGGAAAGTTCATAATAAAGGCCTCATTCTGCTGTGAGGACAGGTCAGATCTGTTGCCAGAACTCATCAAAACCCTCAAAGCACTTAAGCTAAGAACCCTCAAAGCAGAAATCACCACACTTGGTGGCCGAGTCAAGAATGTGTTGTTCATCACTGGTGAAGAAGACGGTGGCGACTCGGAAAGTAGCGGCGAGGCTTATCATCATAATAATCATCAGTATTGTATAAGTTCGATACAAGAAGCGCTTAGAGCTGTGATGGAGAAAAATGGTGGTGGTGGGGATGAGACAGCAAGTGGGGCTGTTAAGAGACAAAGGACTAATAACCTTAATATCATCGAACACAATAGGTCTTTATAA 1050 0.4629 MKREEEYGQCSSEAINNYHTYQEQLFMQQMQQQQNTMFPEVSPWNIPPVHSFNQPVQHHHFSNPVRADNDPFLLPPPPPPPPYGGLFNRRVPNSLQFAYDGCSPSDHLRLLSEALGPMVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELTVDTADDDEDLTDNDGKFIIKASFCCEDRSDLLPELIKTLKALKLRTLKAEITTLGGRVKNVLFITGEEDGGDSESSGEAYHHNNHQYCISSIQEALRAVMEKNGGGGDETASGAVKRQRTNNLNIIEHNRSL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0936 349 SMART finulus 153 202 IPR011598 GO:0046983
Mibi10g0936 349 PANTHER TRANSCRIPTION FACTOR BHLH30 28 341 IPR045847 GO:0003700|GO:0006355
Mibi10g0936 349 CDD bHLH_AtAIG1_like 142 219 - -
Mibi10g0936 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Mibi10g0936 349 Pfam Helix-loop-helix DNA-binding domain 150 196 IPR011598 GO:0046983
Mibi10g0936 349 FunFam transcription factor bHLH30 142 205 - -
Mibi10g0936 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 203 IPR036638 GO:0046983
Mibi10g0936 349 Gene3D - 142 203 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0936 Mibi-ChrMibi10 27349188 27351829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0936 11 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 53.804 6.11e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0936 HLH 1.7e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0936 10 27349188 27351829 Mibi10g0936 10 27349188 27351829 ECH