Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0933 ATGGCTGGGTGTGTACCTTTGTCTCTCGTTTTTCTTTTCTCTGTGTTTGTTGATTATCAAACTCTTTATTCAGGATGTAAAAGGCTGTTAAGACTTTGTATCTGTTATTGTTGTTGCAGAACATCCTGGTTGGTGGACAAGAGTAGAATAGCAACCAAAATTAAGAGTGCTTCTGGGGCACTTGATCCTGAGAAGGTTAAATGGAAAAGCAATCCTACCAGAGCTTGCCCAAATTGTCAGCACATTATCGATAACAGTGATGTAGCACAAGAATGGCCTGGATTGCCGAAGGGTGTGAAATTTGATCCATCGGATCATGATATAATTTGCCACTTGCTTGCTAAAGTTGGTGTGGCAAATTCAAGAGCTCATCCTTTTGTTGATGAATTTATCACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCAAAACATTTACCAGGTGTTAATCAAGATGGAAGTGCAACCCACTTCTTCCATAGAGCAATCAAGGCTTACAACACTGGAAATCGAAAGCGCAGAAAAATACATGGTCAGGATTCTGGGGATGTCCGCTGGCACAAGACTGGAAGAACTAAACCCGTCATGCTGGATGGGGTTCAGAAGGGCTGTAAAAAGATCATGGTTCTTTATATAACCATGGTTAGAGGAGGTAAAGCAGAGAAAACTAATTGGGTTATGCATCAGTATCACCTAGGAACACAAGAAGATGAGAAGGAAGGAGAGTATGTTGTCTCTAAAGTTTTTTACCAGCAGCAGCAGGTCAAATCAGGGGATAAAGATGGCCTGGAAATTCCTGCAAGCACCATGGATGTTCCTGAAAGTTCTGGAAACATTGAAGCAACAATGGTGCCGGTTGATCCGGTCACTCCTAAATCAGTGACTCCTGATCCACCTTGCAACAAAAGACCACATTCTAACATTGATGTGGGACTAGAATCTCACTCCATTCCTCAGGATCCTCCAATGGACTGTGTGGAAGACGCCTGTCTAGTTGATTGTGAAGAGCCAAAAACTGATGTACTCAAGGAAGAAAATCAAAATAGTGACAAAGGAACGGATAATAATGAAAATGACGATGCTATTGAAGAACCTAAATGGTGGGATAGCGAGTCACAGCATTTGTTGAATTCACAGCAACTCGTTGAAGCATTGTCCTTATGTGAGGACCTCTTTCACAGCCAATCTCCCAATAGAGATGATAAGAGTGGAGAACACAACGACCGACCTGGTCTCTCTGTCTATGCTCAACTAGGACCAGAGCATCTGAAAAAGGATATTGAAGAGTGCCAAAATCTCGCTAACGATACAGCAAATATAGATCTTGATACACCCCCTGACTTTAGACTAAGCCAGCTGGAGTTTGGTTCACAAGATAGCTACATTTCCTGGGGTGGCAGCAAGACATAG 1416 0.4223 MAGCVPLSLVFLFSVFVDYQTLYSGCKRLLRLCICYCCCRTSWLVDKSRIATKIKSASGALDPEKVKWKSNPTRACPNCQHIIDNSDVAQEWPGLPKGVKFDPSDHDIICHLLAKVGVANSRAHPFVDEFITTLEVDDGICYTHPKHLPGVNQDGSATHFFHRAIKAYNTGNRKRRKIHGQDSGDVRWHKTGRTKPVMLDGVQKGCKKIMVLYITMVRGGKAEKTNWVMHQYHLGTQEDEKEGEYVVSKVFYQQQQVKSGDKDGLEIPASTMDVPESSGNIEATMVPVDPVTPKSVTPDPPCNKRPHSNIDVGLESHSIPQDPPMDCVEDACLVDCEEPKTDVLKEENQNSDKGTDNNENDDAIEEPKWWDSESQHLLNSQQLVEALSLCEDLFHSQSPNRDDKSGEHNDRPGLSVYAQLGPEHLKKDIEECQNLANDTANIDLDTPPDFRLSQLEFGSQDSYISWGGSKT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0933 471 ProSiteProfiles NAC domain profile. 95 253 IPR003441 GO:0003677|GO:0006355
Mibi10g0933 471 FunFam NAC domain-containing protein 8 104 257 - -
Mibi10g0933 471 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 41 433 IPR044799 GO:0003700
Mibi10g0933 471 MobiDBLite consensus disorder prediction 288 324 - -
Mibi10g0933 471 SUPERFAMILY NAC domain 80 253 IPR036093 GO:0003677|GO:0006355
Mibi10g0933 471 MobiDBLite consensus disorder prediction 396 410 - -
Mibi10g0933 471 Pfam No apical meristem (NAM) protein 96 234 IPR003441 GO:0003677|GO:0006355
Mibi10g0933 471 MobiDBLite consensus disorder prediction 395 414 - -
Mibi10g0933 471 MobiDBLite consensus disorder prediction 343 363 - -
Mibi10g0933 471 Gene3D NAC domain 104 258 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0933 Mibi-ChrMibi10 27229132 27233183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0933 42 260 NAC Transcription Factor Family AT4G28500 50.222 1.32e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi10g0933 NAM 4.8e-19 No_clan