Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0918 ATGCAAAGCTTCAAGACCTCTCAATCCACCCCTCAACAACTCTATTGCCACCCCTCCGTCTTTCTCCGGGGAGATGACCCTGCCAGAAATCCTACTCGTTTCTCTGATCTTGGAGAGCTTCACCATTCTGTTTCTCCCTTTCAACATGACGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTTAAGTCCAGCAATGTCGCTGTTGTCCCTATTAACTTGCAGTACGGGACATTGAACTCGAACATTGGGTCTTCAGAAATTGCTACAACTGGAATTGGATGCCTTGATACAGGGCAGCATCTCATGTATCAGAAGGGAATCACGGCTGCCGTGCCGGTGGGGAACGGACATATGGAGAATTGGGGTGATTCTGGCATGGTTGATAGTAGCCAACACACTGATACTTCCACAGATATTGACCTTGATGATAGTAGAAACCAATGTAATAAAGTTCAGCCTGGGAGAGCCATGGTTGCTGATTCAATGGATCAACCTAGGGCCAAACCTGAGGATCCAAAGACTCTTCGTAGGCTCGCTCAGAATCGAGAGGCTGCAAGGAAGAGTCGATTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGTTTGAGGCTAGCACAACTAGAGCAAGAGCTCCAACGCGCACGTCAGCAGGGAATGCTTGTTGCGAGTGGATATCCTGGTGATCATAGTCATCCAATTGTTGGAAATGGTGCCTTGGCATTTGACATGGACTATGCGCGCTGGTCTGATGAGCATCAACAGCTGATAAATGACCTAAGAACGGCTGTGAATTCTCATATGGGAGACAACGAGCTGCATATTATTGTTGAGGGTGTTACGGCGCATTATGATGAATTATTCAGGTTAAAGAGCATGGGGGCGAAGGCTGATGTGTTTCACATGCTCTATGGTATGTGGACGACGCCTGCAGAAAGATGTTTTATATGGTTAGGTGGGTTTCGTTCATCTGAACTTCTTAAGATACTGAGTAACCAGCTTGAGCCATTGACAGAGCAGCAAGTTATGGGCTTGTATAATTTGGAGCGGTCTTCGTCACAGGCCGAGGATGCTTTAACACAAGGCATGGACGCATTGCATCAATCTCTCTCAGATACACTTTCCTCAGCTTCCCTTGGACCCGCCGGTTCCAGCAACGTTGCTGAATACATGGGTCAAATGGCACTTGCTATGAGCAAACTTGCCACCTTAGAGAGTTTCCTACATCAGGCTGATCTCTTGAGGCAAGAGACATTGCAACAACTGAAGAAAATCTTGACCACACGACAAATGGCACGCGCATTCCTCGTGATAAATGACTACATTTCGCGACTACGAGCACTAAGTTCGTTATGGTTAGCTCGCCCAAGAGAGTAG 1386 0.469 MQSFKTSQSTPQQLYCHPSVFLRGDDPARNPTRFSDLGELHHSVSPFQHDDAVDLSSSSMFTVKSSNVAVVPINLQYGTLNSNIGSSEIATTGIGCLDTGQHLMYQKGITAAVPVGNGHMENWGDSGMVDSSQHTDTSTDIDLDDSRNQCNKVQPGRAMVADSMDQPRAKPEDPKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGMLVASGYPGDHSHPIVGNGALAFDMDYARWSDEHQQLINDLRTAVNSHMGDNELHIIVEGVTAHYDELFRLKSMGAKADVFHMLYGMWTTPAERCFIWLGGFRSSELLKILSNQLEPLTEQQVMGLYNLERSSSQAEDALTQGMDALHQSLSDTLSSASLGPAGSSNVAEYMGQMALAMSKLATLESFLHQADLLRQETLQQLKKILTTRQMARAFLVINDYISRLRALSSLWLARPRE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0918 461 Pfam bZIP transcription factor 175 213 IPR004827 GO:0003700|GO:0006355
Mibi10g0918 461 Coils Coil 194 221 - -
Mibi10g0918 461 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Mibi10g0918 461 Gene3D - 174 225 - -
Mibi10g0918 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Mibi10g0918 461 PANTHER TRANSCRIPTION FACTOR TGA9 118 461 - -
Mibi10g0918 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Mibi10g0918 461 MobiDBLite consensus disorder prediction 128 147 - -
Mibi10g0918 461 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Mibi10g0918 461 ProSiteProfiles DOG1 domain profile. 242 458 IPR025422 GO:0006351|GO:0043565
Mibi10g0918 461 MobiDBLite consensus disorder prediction 155 178 - -
Mibi10g0918 461 FunFam BZIP family transcription factor 174 223 - -
Mibi10g0918 461 SMART brlzneu 171 224 IPR004827 GO:0003700|GO:0006355
Mibi10g0918 461 CDD bZIP_HBP1b-like 175 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0918 Mibi-ChrMibi10 26943134 26946221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0918 3 461 bZIP Transcription Factor Family AT1G68640 58.599 8.65e-168 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi10g0918 DOG1 7.7e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0918 10 26943134 26946221 Mibi10g0918 10 26943134 26946221 ECH