Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0897 ATGACTCCCCCTAAAATCGCCGCCGCAGGCGGCAAAACCGCCAGAGCCTGCGACAGCTGCATAAGAAAACGTGCCCGTTGGTATTGCGCCGCCGATGATGCTTTTCTCTGCCAATCATGTGACTCTCTTGTCCACTCCGCCAACCCCTTGGCCCGCCGCCACGAAAGGCTCCGCCTGAAAACTTCATCATTCAAATCCTCCGCCGCCACCGCCGCCGCCGCCGCCGCCGATATGACCCTCGCTCCGTCGTGGCACCGTGGCATCACGAAAAAAGCTCGTACCCCACGACACGGGAAAAACCTGTCTCCCGGCGGCGCCAGCCACCGTCAAACCTCCCGCCGGCGAGACGAACCCAACATCAGAAATCCCTTCCATCTTGTCCCGGAAGTTGCTTCCGATGAGTATTCCAATTCTCATGACGAAAATGAAGAGCAGCTCCTTTATCGTGTACCCATATTCGATCCTTTTGTAACAGAGCTTTGTACTACTCCTCCATCTTCCTCTGTAACTTCAGCTGAAGCAGTGGTAACAGCAGAAACTCCTCGTTTGAATCAGACAGAAAGCAAATTCGTGTCATCGGAGAATAAAAGTAGTGCTACTGATGATGATAATAATAATAACGGGGTGGAGAATTTACATGGGTTTCTTCCATCGGAGATGGAACTTGCTCAATTTGCGGCTGACGTTGAGAGTTTATTGGGAAGGGGATTGGAGAATGAGTGTATAGGAATGGAGGATTTGGGGATTATTGATAGTAAAGAGAAGGAATCGAGGGATAATTATTCAGTGGGTAGTGAAAAAGTGAAGGTGGAAGATGATGTTGATGATGATGATGAAGATAGTCCATCATGTAAGGTTGAGAATGATGAGATGGAGATGGGGATTAGAGAAGCATTTGAATTGAACTTCGATTACGATGATTCTCCGGCGGCAACTCGCGAAGAACCGGAGGATGAGGACGAGGATTTTGAAGAGGAGAAGAAGGTTGGTTTGGATATGGCTAATAAAGATATGAGGAACAATGAAGAGGAAATTAAAGCAAATGGTAGTGATCAGAGGAAGAAGAAGATATTGTTGCAATTGGACTATGAAGCAGTCATATCAGCTTGGGCATCACAAAAATCTCCATGGACCACCGGCGGCAAACCGGACTTCGGTGCCGACGATTGTTGGCCAGAGTGCATGGGAACATGTGGATTGGAGCTGCATCAACCATACTATGGAGAAATGGGGACATACCAAGGAGGAATGGGAGATGGAGGGAGAGAAGCAAGAGTGACAAGGTACAGAGAGAAGAGGAGGACGAGGTTGTTCTCTAAGAAAATAAGGTACGAGGTTCGAAAATTGAATGCAGAGAAAAGACCCAGAATGAAAGGAAGGTTTGTGAAGAGGGCTTCTTTTGCTGTTGCTACTAACACACAACCTTCCTCCTGCTCTTTCCTCAACAAATCAATTAATTAG 1461 0.4771 MTPPKIAAAGGKTARACDSCIRKRARWYCAADDAFLCQSCDSLVHSANPLARRHERLRLKTSSFKSSAATAAAAAADMTLAPSWHRGITKKARTPRHGKNLSPGGASHRQTSRRRDEPNIRNPFHLVPEVASDEYSNSHDENEEQLLYRVPIFDPFVTELCTTPPSSSVTSAEAVVTAETPRLNQTESKFVSSENKSSATDDDNNNNGVENLHGFLPSEMELAQFAADVESLLGRGLENECIGMEDLGIIDSKEKESRDNYSVGSEKVKVEDDVDDDDEDSPSCKVENDEMEMGIREAFELNFDYDDSPAATREEPEDEDEDFEEEKKVGLDMANKDMRNNEEEIKANGSDQRKKKILLQLDYEAVISAWASQKSPWTTGGKPDFGADDCWPECMGTCGLELHQPYYGEMGTYQGGMGDGGREARVTRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVATNTQPSSCSFLNKSIN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0897 486 ProSiteProfiles CCT domain profile. 422 464 IPR010402 GO:0005515
Mibi10g0897 486 MobiDBLite consensus disorder prediction 255 270 - -
Mibi10g0897 486 MobiDBLite consensus disorder prediction 178 212 - -
Mibi10g0897 486 Pfam B-box zinc finger 14 56 IPR000315 GO:0008270
Mibi10g0897 486 SMART bboxneu5 12 59 IPR000315 GO:0008270
Mibi10g0897 486 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 466 - -
Mibi10g0897 486 MobiDBLite consensus disorder prediction 86 122 - -
Mibi10g0897 486 MobiDBLite consensus disorder prediction 306 326 - -
Mibi10g0897 486 MobiDBLite consensus disorder prediction 255 284 - -
Mibi10g0897 486 MobiDBLite consensus disorder prediction 311 326 - -
Mibi10g0897 486 CDD Bbox1_BBX-like 16 59 - -
Mibi10g0897 486 Pfam CCT motif 422 464 IPR010402 GO:0005515
Mibi10g0897 486 ProSiteProfiles Zinc finger B-box type profile. 12 59 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0897 Mibi-ChrMibi10 26568747 26570464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0897 8 464 C2C2-CO-like Transcription Factor Family AT1G25440 41.469 8.88e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi10g0897 CCT 1.3e-17 CL0281