Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0882 ATGTCTGGTATAACAAGGAGAGAGAACAATAACAAGATGTGTTGTAAAGAAGAAGAGAGTAATCCTGAGATGAGAAGAGGCCCTTGGACTCTTGAAGAAGATAGCCTCCTCATTCACTATATCGCTCGCCACGGCGAAGGTCGCTGGAACATGTTAGCCAAAAGTGCAGGGTTGAAGAGGAATGGGAAGAGTTGCAGATTGAGGTGGCTTAATTACTTGAAACCAGACATCAAGAGAGGAAATCTTACCCCACAAGAACAGCTCATGATCCTAGAACTCCATTCTAGGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATCTGCCAGGAAGAACTGATAATGAGATCAAGAATTATTGGAGGACCAGAGTGCAGAAACAAGCACGGCAACTTAATATTGAATCTGGAAGCAAGAAATTCATTGATGCGATTCGCTGTTTCTGGACTCCAAGATTAGTTCAAAAGGCTGAACAACAACACAAACTGAATTCTCCTTCAACTACCACCACCTCGTACTCTTGTCTCACAACAGACACCAACCTTAATCATCATGTTTCCTCATCATCATCATCTTCTCCAATGTTGTCATCAAATAATTACAACAACAACTCTGTTATTCCTAATCCTCTGTCTTGTTCTCCTTCATCATCATCTTTCCAGCAGCCTTCTGCAAATTTTGCCAGCAATTTTGCCTCTGATTCCTGGCAATTCTCGCAGATTCTGGAACCTTCTTCTTCTGAAGTACTCCCAGAAAGCTGTTATGGTTATATGTTAGAGAACAATAATAATAATTCTAGTTACAGCAACTCAATTCAGGGTCAAAACTTGTCAGTGATGGACAATATGATGACTACTACTACTACTACTGGGTATTATGGAATGGAACATAATGTGATGAACCAGCAAGAACCAGTGACAACAATGGAAACTTGGGACATTTTTCCATTTGATTATTACTATCAGCCAATTACAACAGAAAGTGACTGGAAGTTAGGGAACATGGCAGATCCTTTTTGGGACATGGAAGCTCTGTGA 1035 0.4087 MSGITRRENNNKMCCKEEESNPEMRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRNGKSCRLRWLNYLKPDIKRGNLTPQEQLMILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKKFIDAIRCFWTPRLVQKAEQQHKLNSPSTTTTSYSCLTTDTNLNHHVSSSSSSSPMLSSNNYNNNSVIPNPLSCSPSSSSFQQPSANFASNFASDSWQFSQILEPSSSEVLPESCYGYMLENNNNNSSYSNSIQGQNLSVMDNMMTTTTTTGYYGMEHNVMNQQEPVTTMETWDIFPFDYYYQPITTESDWKLGNMADPFWDMEAL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0882 344 Gene3D - 26 78 - -
Mibi10g0882 344 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Mibi10g0882 344 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Mibi10g0882 344 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 21 203 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi10g0882 344 SMART sant 25 75 IPR001005 -
Mibi10g0882 344 SMART sant 78 126 IPR001005 -
Mibi10g0882 344 SUPERFAMILY Homeodomain-like 23 120 IPR009057 -
Mibi10g0882 344 FunFam Myb transcription factor 26 78 - -
Mibi10g0882 344 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Mibi10g0882 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Mibi10g0882 344 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Mibi10g0882 344 FunFam MYB transcription factor 83 146 - -
Mibi10g0882 344 CDD SANT 83 122 IPR001005 -
Mibi10g0882 344 CDD SANT 28 73 IPR001005 -
Mibi10g0882 344 MobiDBLite consensus disorder prediction 10 26 - -
Mibi10g0882 344 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 41 50 IPR001345 GO:0003824
Mibi10g0882 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Mibi10g0882 344 MobiDBLite consensus disorder prediction 1 26 - -
Mibi10g0882 344 Gene3D - 82 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0882 Mibi-ChrMibi10 26123158 26124433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0882 21 174 MYB Transcription Factor Family AT1G68320 76.623 9.35e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0882 Myb_DNA-binding 6.1e-14 CL0123