Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0875 ATGGAGGACCCAATTGATCACTACCAATCAAAAAGAACACAACCCACAAATAATTCCACCACACGATTAAAGCTCTTCGGCTTCAATGTTCAAGAAGACATAGAAGAAGTAGATGAAGCAATGCTTGAAGACATATCAGATTCCACAACAGGCAAACCCAGCTCGCCTGATTCCCCCGCCGCCGCCGGAGGCGGCGGCGGCAGCCCGGCGTTCCTTCCCTCCTCCGGTGACCGGAAATATGAGTGTCAATATTGTTGTAGAGAGTTTGCTAATTCACAAGCGCTTGGTGGCCACCAAAACGCTCACAAGAAGGAGCGTCAGCAACTAAAGAGAGCGCAATTACAAGCCACACGAAACGCCGCCGTTTCGTTTGTTAGAAATCCGATAATTTCCGCTTTTGCCCCTCCGCCGCATCTCCTAGCCCCAAACGGCTCCGTCGTGGTCCCGGCGGCGGCTCCGGCGGCGTCGTGGGTGTACATGCCGCCGCGGTCGGGGCCGTCCCCGTTCCACGTGTCGGTCTCTCACGGCTGCGTGTTCCCGACGTCGGCGGCACCGGGGCCCACACCGCCGCCACCGCCGGGTAGCGGTGTGAGTTATGGTGGTGTTAACGGTGGGAGATCTGCTGGTGTAGGGATGGTTCCCTATAGTGGCGGTGCAGGGGATTCTACTTCCACATTGTCTTCTATTGGGTCGCCACAACCACTGGGCCGGGTCAACGGTCGGGCCGACGGGCCTTCGTTGAGCCGATTCTCAAAGGTTGAAGCTGGGCCTGGTTTCGATGATTCGTTGGGCTTGGACTTGCATCTTAGCCTTGCACCGGCTGCCCCGTGA 831 0.574 MEDPIDHYQSKRTQPTNNSTTRLKLFGFNVQEDIEEVDEAMLEDISDSTTGKPSSPDSPAAAGGGGGSPAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPNGSVVVPAAAPAASWVYMPPRSGPSPFHVSVSHGCVFPTSAAPGPTPPPPPGSGVSYGGVNGGRSAGVGMVPYSGGAGDSTSTLSSIGSPQPLGRVNGRADGPSLSRFSKVEAGPGFDDSLGLDLHLSLAPAAP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0875 276 MobiDBLite consensus disorder prediction 1 24 - -
Mibi10g0875 276 MobiDBLite consensus disorder prediction 213 255 - -
Mibi10g0875 276 FunFam Zinc finger protein GIS3 68 130 - -
Mibi10g0875 276 MobiDBLite consensus disorder prediction 183 202 - -
Mibi10g0875 276 MobiDBLite consensus disorder prediction 218 234 - -
Mibi10g0875 276 MobiDBLite consensus disorder prediction 10 24 - -
Mibi10g0875 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Mibi10g0875 276 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Mibi10g0875 276 PANTHER ZINC FINGER PROTEIN 5 9 275 IPR044299 GO:0010090
Mibi10g0875 276 SUPERFAMILY beta-beta-alpha zinc fingers 76 107 IPR036236 -
Mibi10g0875 276 Gene3D Classic Zinc Finger 72 127 - -
Mibi10g0875 276 MobiDBLite consensus disorder prediction 37 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0875 Mibi-ChrMibi10 25936659 25937489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0875 16 274 C2H2 Transcription Factor Family AT1G68360 44.981 1.73e-54 175