Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0874 ATGGGGACGGGTTCCAAGATCGATGGACCTTCTACCCCATCGAATCGAAGAGATCCTTATGAGGTATTGTCTGTGTCAAGAGATGCAAATGAGCAGGACATTAAAACGGCTTACAGAAAGCTTGCTCTCAAGTATCACCCTGATAAGAATGCTAACAATCCTGAAGCATCAGAGTTATTTAAAGAAGTTGCATACTCTTACAACATCTTATCTGATCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATACCGATAACTTGGATATGGAAATTGATTTGTCAAATCTTGGAACTGTGAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACAATCTCAGCAAATGTTCTTGAAGAAGCCCTGAATGGCACTGTTACAGTCAGACCGCTTCCTATTGGAACAGCAGTCAGTGGAAAGGTAGAGAAGCAATGCGCTCATTTTTTTGGTGTGACGATAAATGAGCAGCAAGCTGAGGCGGGGATTGTAGTAAGAGTTACTTCAGCTGCACAAAGCAAGTTCAAACTGCTCTACTTCGAACATGATGCAAATGGTGGGTATGGTTTGGCATTACAGGAAGATAGTGAGAAGAATGGCAAGGTGACATCTGCAGGCATGTATTTCTTACATATTCAAGTATACAGAATGGATTCAACTGTCAATGCGTTAGCAATGGCGAAGGATCCTGAAGCTGCTTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGCGAGGTCTCAGAATTAAAGCCTGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTTCCTATACAATTGAGGCTCTTTGTGCAAAATCTTATGAGGACACCTCTCAAAAACTTCAGGACATTGAAGCTCAAATTCTTAGAAAGAGGAATGATTTGCGCCAATTTGAATCAGAATACAGAAAGGCATTGGCACGCTATCAAGAGGTGACAGAAAGATACGCTCAAGAAAAACAATTAGTTGATGAACTTCTGAAAGAGAGAGACACTATCCATTCCTCCTTCACCGTTTCTAGGTCTGTCTCTGTTAGCGCGAGCAGCAGTAATTTAAGTAATGGAAGTAGTAGCAAAATTGCCGGCGAGGAATCCAAGGCCGAGAGCCCTGTGGAAGATGGTAGCTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTTAAGGGGTCTGAAAAGAAGACTTGA 1242 0.4203 MGTGSKIDGPSTPSNRRDPYEVLSVSRDANEQDIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALDTDNLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTAVSGKVEKQCAHFFGVTINEQQAEAGIVVRVTSAAQSKFKLLYFEHDANGGYGLALQEDSEKNGKVTSAGMYFLHIQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEALCAKSYEDTSQKLQDIEAQILRKRNDLRQFESEYRKALARYQEVTERYAQEKQLVDELLKERDTIHSSFTVSRSVSVSASSSNLSNGSSSKIAGEESKAESPVEDGSSDGKDKSGKKKWFNLNLKGSEKKT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0874 413 MobiDBLite consensus disorder prediction 379 413 - -
Mibi10g0874 413 Coils Coil 288 343 - -
Mibi10g0874 413 MobiDBLite consensus disorder prediction 361 377 - -
Mibi10g0874 413 Pfam DnaJ domain 18 80 IPR001623 -
Mibi10g0874 413 CDD DnaJ 18 72 IPR001623 -
Mibi10g0874 413 PRINTS DnaJ domain signature 38 53 IPR001623 -
Mibi10g0874 413 PRINTS DnaJ domain signature 55 75 IPR001623 -
Mibi10g0874 413 PRINTS DnaJ domain signature 20 38 IPR001623 -
Mibi10g0874 413 PRINTS DnaJ domain signature 75 94 IPR001623 -
Mibi10g0874 413 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Mibi10g0874 413 MobiDBLite consensus disorder prediction 361 413 - -
Mibi10g0874 413 SUPERFAMILY Chaperone J-domain 14 88 IPR036869 -
Mibi10g0874 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 11 412 - -
Mibi10g0874 413 Gene3D DnaJ domain 5 99 IPR036869 -
Mibi10g0874 413 SMART dnaj_3 17 75 IPR001623 -
Mibi10g0874 413 FunFam Chaperone protein dnaJ 16 3 100 - -
Mibi10g0874 413 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Mibi10g0874 413 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0874 Mibi-ChrMibi10 25906124 25916297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0874 11 91 C2H2 Transcription Factor Family AT1G74250 38.372 1.38e-11 64.3