Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0871 ATGGCGGCATCCTCTCGCCTCTCTCTACTTCTCCTCTTCTCCTTCTTCTTCTCATTTTCCCATTCGCTTCCCCCCACTGTAGCTTCCATAGACCAAGACTTCAAAGCTTTAATGGCGTTCAAAACCACTTCTGATACTCACAAAAAGCTCACATCTTGGAACTCCACAACCCATCCCTGCAAATGGGTCTTCGTCTCATGCCTCAATAATCGAGTTTCCCGTCTCGTTCTTGAGAATCTCGACCTTCATGGCTCGATCCAGCCCTTAACTTCTCTCACTCATCTTCGAGTTCTGAGCCTAAAGCAAAACCGTTTTTCAGGCTCCATTCCCAATCTCTCTAATTTCACATCTCTCAAGCTTCTTTTCCTCTCTCACAATGATTTCTCCGGTGAGTTTCCGTTGACCGTTACTTCTCTCCTCCGTTTGAACCGCCTTGATCTGTCTCACAACAACTTCAATGGTCACATTCCCACCACAGTTAACAATCTCACTCACCTTCTCTCTCTTCGTCTTAACGATAACAATTTCTCTGGTCACATTCCTGTTTTAAATAACCTCTTGGAGTTACAAGACTTCAATGTCTCTAATAATCGCCTCTCTGGTGAAATACCCAAATCAATGTCTGGTTTTTCTAAATCATCATTTGCTCAAAACCCATCTCTATGTGGAGTTCCATTGTTGAAGTGTAATGATACTACTCATGCCATACCGTTTAAACCCGAAACAGCACCCAAACCTTCATCTAATGGCACTCACCACAATGAAATCGGAGGTTCGAAGATGAGCCCGGTGATTCTGATTGCCATTGTGGTTGGTGACGTTTTGGTTTTGGCGATAGTGTGTTTTCTTCTGTACTGTTGTTTCTGGCAAAATTACTCTGCGAAATTGAGAGATGGAGGGAAGAGGTCGAAGATTTTAGAGAGTGAGAAGATATTGTATTCTTCGAGCCCATACCCAACAACAACCCAAGCTGGATTAGAGAGGGGTCAAATGGTGTTCTTTGATGGGATGAAGAAGTTTGAATTAGAGGATTTGCTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGGTTTGGGACTGCTTATAAAGCTGTTCTTGATGATGGTAATGTAGTGGCAGTGAAGAGGCTTAAGGATGCTCAGATTAGTGGGAAGAAGGAGTTTGAACAGCACATGGAGGTTCTTGGAAGATTGAGACATCCCAATATTGTGAGCTTGAGAGCTTACTATTATGCTCGAGAGGAGAGGTTGCTGGTTTATGATTACATGACCAATGGTAGCTTGTTTTGGCTCCTTCATGGGAACCGTGGGCCCGGAAGAAGCCCACTGGATTGGACCACAAGGCTCAAGATAGCCGCAGGAGTGGGCCGAGGTTTAGCCTACATTCACAGCTCATGCAAGGCCCTTAAGCTCACCCATGGCAACATCAAATCCACCAACATCCTCATTGACCAGGATGGAGACCCACACGTGGCGGATTTCGGGCTGTCCATTTTCGCGATACCAGTCAGCAGATCCAACGGCTATCGTGCCCCGGAAGCATCGGACGAGAGGAAAAACACGCAGAAATCTGACGTGTACTCCTTCGGTGTTCTTCTCCTGGAGCTTCTCACAGGGAAGTGCCCCTCCATTGGGGAAACAGGTGGGCCCGGGGGAGGTGGGGCCATTGATCTGCCTAGGTGGGTCCAATCAGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTTGACATTGAGCTGATGAGGTACAAGGACATTGAGGAGGAGATGGTGGGCCTACTTCAGGTGGCGATGACGTGTTGCGCGGCTATGCCAGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGACATACGTGGGGTCGAGATTTCTCCGAGTCATGACACGTCAGACTCGGTGTCTGAGTCACCGTCCTTGTCAGGCGAGTGA 1935 0.477 MAASSRLSLLLLFSFFFSFSHSLPPTVASIDQDFKALMAFKTTSDTHKKLTSWNSTTHPCKWVFVSCLNNRVSRLVLENLDLHGSIQPLTSLTHLRVLSLKQNRFSGSIPNLSNFTSLKLLFLSHNDFSGEFPLTVTSLLRLNRLDLSHNNFNGHIPTTVNNLTHLLSLRLNDNNFSGHIPVLNNLLELQDFNVSNNRLSGEIPKSMSGFSKSSFAQNPSLCGVPLLKCNDTTHAIPFKPETAPKPSSNGTHHNEIGGSKMSPVILIAIVVGDVLVLAIVCFLLYCCFWQNYSAKLRDGGKRSKILESEKILYSSSPYPTTTQAGLERGQMVFFDGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQISGKKEFEQHMEVLGRLRHPNIVSLRAYYYAREERLLVYDYMTNGSLFWLLHGNRGPGRSPLDWTTRLKIAAGVGRGLAYIHSSCKALKLTHGNIKSTNILIDQDGDPHVADFGLSIFAIPVSRSNGYRAPEASDERKNTQKSDVYSFGVLLLELLTGKCPSIGETGGPGGGGAIDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQVAMTCCAAMPDQRPRMSHVVKMIEDIRGVEISPSHDTSDSVSESPSLSGE 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0871 644 ProSiteProfiles Protein kinase domain profile. 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0871 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 621 - -
Mibi10g0871 644 Gene3D Ribonuclease Inhibitor 90 236 IPR032675 -
Mibi10g0871 644 Gene3D Ribonuclease Inhibitor 26 89 IPR032675 -
Mibi10g0871 644 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Mibi10g0871 644 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Mibi10g0871 644 MobiDBLite consensus disorder prediction 625 644 - -
Mibi10g0871 644 Gene3D Phosphorylase Kinase; domain 1 320 422 - -
Mibi10g0871 644 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Mibi10g0871 644 Pfam Protein kinase domain 351 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0871 644 FunFam pollen receptor-like kinase 1 319 422 - -
Mibi10g0871 644 SUPERFAMILY Protein kinase-like (PK-like) 351 617 IPR011009 -
Mibi10g0871 644 MobiDBLite consensus disorder prediction 627 644 - -
Mibi10g0871 644 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 630 - -
Mibi10g0871 644 CDD STKc_IRAK 353 620 - -
Mibi10g0871 644 FunFam Nuclear pore complex protein NUP107 30 182 - -
Mibi10g0871 644 SUPERFAMILY L domain-like 45 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0871 Mibi-ChrMibi10 25878480 25882181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0871 33 642 Receptor kinase-like Gene Family AT1G68400 65.094 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi10g0871 Pkinase 1.3e-38 CL0016