Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0870 ATGGCGGCTTCCTCTCGCCTCCTTCCCCTCCTCCTCTTCTCCTTCTTCCTCCTTTCCCATTCTCTTCTTCCCACTGAATCCTCCATACACCATGATTCCCAATCTTTAATAGCCTTCAAATCCATTTCTGATCCTCACAACACAAAGCTCACATCTTGGAACTCCTCCACCAATCCCTGCAATTGGGATTTCATCTCTTGCTCCAAAAACAGAGTCTCCCGTCTCAATCTTCAAAATCTCAACCTCCATGGTTCAATCCACCCCTTAACTTCCCTCACTCACCTCCGACTTCTCAACCTTAAACATAACCGTTTTAACGGTCACATCCCCAATCTTTCCAATCTCACAATCCTCAATCATCTTCTTCTTTCTCATAATGATTTCTCCGGTGAGTTCCCGGTGACCGTCACGTCGCTTCGCCGTTTGTATCGCCTTGATTTGTCTCATAATAACTTCTCCGGCGACATTCCCGCCGCCGTTAACAACCTCACTCGCCTCCGCTCCCTCCGTCTCAATGATAACCAATTCTCCGGCGACATTCCCGTCATTAATCTCCCCAAATTACGAGAATTCAATTTCTCCGGTAACCCATTTTCTGGCGACATTCCCATCATTAATCTCATCAAATTACGAGAATTCGATTTCTCCGATTACCGATTTCACGGGGAATATGTGGGGCCCAATGTCGGGTCAGAGAGCCTGAGCCAGAGCATGAACCTGATAATTATACTGGCCATTGTAAATAGCTATGTTCTGATTCGGGCCATAGTGTCATTTCTTCGGTACTTGGGGTTTAGGCTAAAATACCCTGCAGAATTTAAAGGAGAAGGAATCAGGGAGAAGCTTTTAGAGAAGAAAAGCCCAGGCCCAGGCCCATTATCATCAAAGCAGGAGGGTAGTCAAGAAGTGGTGTGCTTTGAAGGGATAAAGAAGTTTGATCTGAAGTGTTTGATGATGAAATCCCCTGCACAAGTGATGGGGAAAGGTGAATTCAGGGAGGCTTATAAAGCTTTTCTTGAGGATGGTTATGTGATTAGTGTGAAGAGGCTTAAGGATGCTGAAATTAGTGGGAGGAAAGAGATGGAGCAACATATGGAGGTTTTGGGGAAATTAAGGCATCCCAATGTTGTAAGCTTGAGAGCTTGCTATGCTCATATGGATCCCAATGATATATTGCTGGTTTATGATTATATCGTCAATGGTAGCTTGTTTTCCCTCCTACATGGTATGTATGTTTCTTTTGATTCATAA 1251 0.4452 MAASSRLLPLLLFSFFLLSHSLLPTESSIHHDSQSLIAFKSISDPHNTKLTSWNSSTNPCNWDFISCSKNRVSRLNLQNLNLHGSIHPLTSLTHLRLLNLKHNRFNGHIPNLSNLTILNHLLLSHNDFSGEFPVTVTSLRRLYRLDLSHNNFSGDIPAAVNNLTRLRSLRLNDNQFSGDIPVINLPKLREFNFSGNPFSGDIPIINLIKLREFDFSDYRFHGEYVGPNVGSESLSQSMNLIIILAIVNSYVLIRAIVSFLRYLGFRLKYPAEFKGEGIREKLLEKKSPGPGPLSSKQEGSQEVVCFEGIKKFDLKCLMMKSPAQVMGKGEFREAYKAFLEDGYVISVKRLKDAEISGRKEMEQHMEVLGKLRHPNVVSLRACYAHMDPNDILLVYDYIVNGSLFSLLHGMYVSFDS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0870 416 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 409 - -
Mibi10g0870 416 Gene3D Phosphorylase Kinase; domain 1 296 397 - -
Mibi10g0870 416 Gene3D Ribonuclease Inhibitor 31 136 IPR032675 -
Mibi10g0870 416 SUPERFAMILY L domain-like 39 224 - -
Mibi10g0870 416 Pfam Protein kinase domain 324 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0870 416 SUPERFAMILY Protein kinase-like (PK-like) 324 409 IPR011009 -
Mibi10g0870 416 ProSiteProfiles Leucine-rich repeat profile. 94 116 IPR001611 GO:0005515
Mibi10g0870 416 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Mibi10g0870 416 FunFam Leucine-rich repeat receptor-like protein kinase 29 182 - -
Mibi10g0870 416 ProSiteProfiles Protein kinase domain profile. 320 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0870 416 Gene3D Ribonuclease Inhibitor 137 250 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0870 Mibi-ChrMibi10 25844574 25845824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0870 32 409 Receptor kinase-like Gene Family AT1G68400 44.262 5.12e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi10g0870 Pkinase 2.2e-08 CL0016