Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0860 ATGCCTCTCATCGACATTCTTAGTCTTGGCCAATGGTCTTATGGTCATACATTTGTTCTAACTCCTAATTCCGAGACAACTGCCGTATCAAATATCCAACCTTCACATAACAGCATAAAACCTTTAAGCAAGTCATTATTTGAAACAGTAGTCATTAAGACTCCAAGTTCAATTTCGTTTTTGTTCACTGAGAGAGGGTTCCAGAAGACTGGTTCTACCTGTTCATGTGTTCCCCTTCATCTTCTTCTTCTGTCTTCTGATTTTTCTGAAGAGTGTCCATCTTCCTTTCACTATGGAAATCTGGCCAACCTCAGACTCTCTTTTACCACTTCAAAACATAGCAATTGTGGAATGTTGGCCATTCATGGTTGTGAAGACCATAATCCCAACGCAACTAAAATTGTGCAATTCAGTGGAAAGATGTTTCAAGTGAGGAGTATAGATCATCACTTTCGTAAAAATAGTGTTTCAGTGAGAGACACAGCTTTACAAAATAGTTTGTATAAAGATGAATGTCATGCCTTGTGCTACAATATTACTCTTTCTCCCACCTCTGCCTTGGGTTCTTTTGAGATCTTTCCATACCCAGTAACCTTTTACAAATGTAATGTTAGTCTCAAAGTTAGCCCTCCAAAGCAATTCTTCAACTATACAAGGATTGGCAAGAGGAAGCTCCAAGATGGGCGTGAAGTTGCAGTGAAACACCTATTCAACCACAACTATAAGAGAGTGGAACAATTCATGACAGAAGTTGAGATCCTCACTCACCTGCGTCACAAGAATCTTGTCTCCCTTTATGGCTGCACTTCGTGGCAAAGCAGTGAGCTCCTCCTTGTCTATGAATACATCTCAAATGGTACCCTTGCCAGCCACCTCCAGGGAGTCTCTGCAAATCCTGTGTTGCTGACATGGCCTATACGTATCAAAATTTCCAGAGAAGCTGCCACGGCTCTAGCTTACCTTCATGCTTCTGGCATCATCCACCCTGTTGACATGGGAAGGAATAAAGATGAGATTACATTGGGGGATCTAGCACTGAGGAAGATTCAAAAAGGTGAATTTGAGGAGATGGTGGATCCATGTTTGGGGATAGAGAAGGATAGTGAGGTGAAGAAGAAGCTGGTTGCTTTGGGGGAATTGGCATTTCAGTGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATTGAGAGTGGAAAGAAAGATAAGGAAGCAGGGGAAGATGGTGATGATGATATTAATGAAACTTCAAAGAATAAAGGAGATATGCATGCACTATCAGTGACTTCAATAAACTTTGACAAGGCAAAGTTGTTCAAGTCAGAATCTTCACCAAACAACATGATTGAGAAATGA 1383 0.4093 MPLIDILSLGQWSYGHTFVLTPNSETTAVSNIQPSHNSIKPLSKSLFETVVIKTPSSISFLFTERGFQKTGSTCSCVPLHLLLLSSDFSEECPSSFHYGNLANLRLSFTTSKHSNCGMLAIHGCEDHNPNATKIVQFSGKMFQVRSIDHHFRKNSVSVRDTALQNSLYKDECHALCYNITLSPTSALGSFEIFPYPVTFYKCNVSLKVSPPKQFFNYTRIGKRKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTHLRHKNLVSLYGCTSWQSSELLLVYEYISNGTLASHLQGVSANPVLLTWPIRIKISREAATALAYLHASGIIHPVDMGRNKDEITLGDLALRKIQKGEFEEMVDPCLGIEKDSEVKKKLVALGELAFQCLQIDKEMRPSIDEVLEVLRKIESGKKDKEAGEDGDDDINETSKNKGDMHALSVTSINFDKAKLFKSESSPNNMIEK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0860 460 Gene3D Transferase(Phosphotransferase) domain 1 330 431 - -
Mibi10g0860 460 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 222 328 IPR044652 GO:0004672
Mibi10g0860 460 Gene3D Transferase(Phosphotransferase) domain 1 205 329 - -
Mibi10g0860 460 ProSiteProfiles Protein kinase domain profile. 204 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0860 460 SUPERFAMILY Protein kinase-like (PK-like) 224 405 IPR011009 -
Mibi10g0860 460 Pfam Protein tyrosine and serine/threonine kinase 224 328 IPR001245 GO:0004672|GO:0006468
Mibi10g0860 460 MobiDBLite consensus disorder prediction 409 430 - -
Mibi10g0860 460 MobiDBLite consensus disorder prediction 409 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0860 Mibi-ChrMibi10 25650683 25653291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0860 330 407 Receptor kinase-like Gene Family AT1G25390 42.308 1.01e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0860 PK_Tyr_Ser-Thr 4.1e-17 CL0016