LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi10g0856	ATGTTGCCGATTCATGGGTGTGAAGATAATGAACACCCCAACACTAAAAAAACTGTCTACTTTGGGAAAAGTATGTCTCAAGTTAAAAGAATAGGCAACACTTTGAATACTCAAGTTTCCGTAAAAGACGCAGATTTAGAGAAGCGTTTGGAAAAAGAAGAATGTGATGCCTTGTGCTGCAATATTACTCTTCCTCCCACCTCTCCTTTGGGTTCTTTTCATATCATTCAGGACACAATAACTTTTTACAAATGTGATATTAGTCTCAAGGTTAGCCCTCCAAAGCGATTCTTAAGGCATGAAGGATGTGGTAAGAGTAATAATGAGACCATCTACTTTAGAACCCAAGATCAAGATGATCCACCTCCTTCTTTAGCAAACTGTTCATGGGTTCAGCTTCCAGCCAATAAGCTGGCTTTCTCTCCTGATCCTTTCACATTCATATCTTCTGAATTCTCCGTTAACATTCGAGTTTCTCATGACTGTGTTGCATGTACTTTTTACGATAAAGGCACATGCCTGCTCAATCACACACCGGAGGATTTTATTGTTCCAAATTCAAAGCTAGGAAAGCTTAAAGATGGACGAGAAGTTGCAGTGAAGTGCCTGTTTAAGCACAACTATAGGGTACAGCAATTCATAAATGAAGTTCAGATCCTTACACGCTTACGCCACAGAAACCTTGTATCACTCTATGGATGCACTTCATGTACCAATCATGAACTGCTGCTGGTCTATGAATATATTTCAAATGGAACTCTTGGCTCTCATCTATATGGAAATCAAGCAAAATCTGGCTCATTGCCATGGCCAATGAGGATGAGGATTTCCATAGAGATAGCAAATGCATTGTCCTATCTCCATGCTTTGAGAGAGGGTTCCAGAAGAATGGTTGTACCTATTCATGTGCTCCTCTTCTTGTTTTCTGGCCATGTTCTTCCCCTTTCTTCTGCTTCTTATGAAGAGTGTCCATCTTCCTTTCAATGTGGGAATCTGGGCAACCTCAGATTCTCTTTTACCACCTCAGAACAAAACAAGTGTGGAATGTTGGCCATTCATGGTTGTGAAGACCATAATCCCAACACAAATAAAACTGTGCATTTCAGTGGAAAGAAATTCCAAGTGAGGAGTGTAGATCACTTTTATAAAAGTACTGTTATCCTAAGAGACACAGCTTTACAAAATAGTTTGGAAAAAGATGACTGTGATGCCTTGTGCTGCAATATTACTCTTCCTCCCTCCTCTGCCTTGGGTTCTTTTGAGATCTTTCCATACAAGATAACCTTTTACAAATGTAATATTAGTGACAAACACAGCCCCCCAAAGCAATTCTTGAACCATACAGGATGTGGTGAGAGAAATAATGAGACGATCATCTTCTTTGGATCGCAAGATCAAGATGATCCTCCTCCAACTTCTTTAGCAAAATGTCCAAGGGTTCAGCTTCCAGTGCATAAGATGTATCTCTCTGATGATCCATTAACATTAATAGCTTCTGAATTCTCTGTTGGAATTTACCTTTCTGATGACTGTCTCCAATGTTCAAAGCACAACAAAGGCATATGCTCGCTCGACAGCAAAGGAGCATTTTATTGCTCCAAATCCAAAGGAAAGCTTCAAGATGGGCGTGAAGTTGCAGTGAAACACCTATTCGACCACAACTACAAGAGAGTGGAACAATTCATGACAGAAGTTGAGATCCTCACTCGACTGCGTCACAAGAATCTTGTCTCCCTCTATGGCTGCACTTCGCGGCAAAGCCGTGAGCTCCTCCTTGTCTATGAATACATCTCAAATGGCACGCTTGCAAGTCACCTCCAGGGAGTATCTGCAAATCCTGTGTTGCTGACATGGCCTATACGTATCAAAATCGCCATAGAAAGAGCCACAGCTCTAGCTTACCTTCATGCTTCCGGCATTATCCACCCGGTTGATATGGGAAGGAATAAAGATGAGATTACATTAGGGAATCTAGCACTGAGGAAGATTCAGAGGAATGAATTTGAGGAGATGGTGGATCCATGTTTGGGGATAGAGAAGGATAGTGAGGTGAAGAAGAAGGTGGTTGCTTTGGGAGAATTGGCGTTTCAGTGTTTACAAATGGATAAGGAGATGAGGCCTTCCATTGATCAGGTTTTAGAGGTTTTGAGGAAAATTGAGAGTGGAAAGAAAGATAAGGAAGCAGGGGAAGATGGTGATGGTGATATTAATGAAACTTCAAAGAATAAAGGAGATATGCATGCACTATCAGTGACTTCAATAAACTTTGACAAGGCAAAGTTGTTCAAGTCCGAATCTTCACCAAACAACATGAATGAGAAATGGGGAGGTGGAGAAGTTGATAAGGCCAAGTTGTTTAGCATTTGTTCTCTAAGAATGTTGTTATTCACTGTTCTGCTCCATGTTTCGCTGATTTTGAAGCATTGCTGCATGTCACTACTTATCCTTCGTTACCCTTTCAAGTCAAGAAATATGCGATCCACCAAAATAACTATGTGA	2499	0.4086	MLPIHGCEDNEHPNTKKTVYFGKSMSQVKRIGNTLNTQVSVKDADLEKRLEKEECDALCCNITLPPTSPLGSFHIIQDTITFYKCDISLKVSPPKRFLRHEGCGKSNNETIYFRTQDQDDPPPSLANCSWVQLPANKLAFSPDPFTFISSEFSVNIRVSHDCVACTFYDKGTCLLNHTPEDFIVPNSKLGKLKDGREVAVKCLFKHNYRVQQFINEVQILTRLRHRNLVSLYGCTSCTNHELLLVYEYISNGTLGSHLYGNQAKSGSLPWPMRMRISIEIANALSYLHALREGSRRMVVPIHVLLFLFSGHVLPLSSASYEECPSSFQCGNLGNLRFSFTTSEQNKCGMLAIHGCEDHNPNTNKTVHFSGKKFQVRSVDHFYKSTVILRDTALQNSLEKDDCDALCCNITLPPSSALGSFEIFPYKITFYKCNISDKHSPPKQFLNHTGCGERNNETIIFFGSQDQDDPPPTSLAKCPRVQLPVHKMYLSDDPLTLIASEFSVGIYLSDDCLQCSKHNKGICSLDSKGAFYCSKSKGKLQDGREVAVKHLFDHNYKRVEQFMTEVEILTRLRHKNLVSLYGCTSRQSRELLLVYEYISNGTLASHLQGVSANPVLLTWPIRIKIAIERATALAYLHASGIIHPVDMGRNKDEITLGNLALRKIQRNEFEEMVDPCLGIEKDSEVKKKVVALGELAFQCLQMDKEMRPSIDQVLEVLRKIESGKKDKEAGEDGDGDINETSKNKGDMHALSVTSINFDKAKLFKSESSPNNMNEKWGGGEVDKAKLFSICSLRMLLFTVLLHVSLILKHCCMSLLILRYPFKSRNMRSTKITM	832

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi10g0856	832	Gene3D	Transferase(Phosphotransferase) domain 1	646	744	-	-
	Mibi10g0856	832	MobiDBLite	consensus disorder prediction	724	743	-	-
	Mibi10g0856	832	Gene3D	Phosphorylase Kinase; domain 1	527	597	-	-
	Mibi10g0856	832	ProSiteProfiles	Protein kinase domain profile.	152	495	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi10g0856	832	Gene3D	Transferase(Phosphotransferase) domain 1	186	308	-	-
	Mibi10g0856	832	MobiDBLite	consensus disorder prediction	724	742	-	-
	Mibi10g0856	832	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	301	534	IPR044652	GO:0004672
	Mibi10g0856	832	ProSiteProfiles	Protein kinase domain profile.	519	832	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi10g0856	832	Pfam	Protein tyrosine and serine/threonine kinase	538	642	IPR001245	GO:0004672\|GO:0006468
	Mibi10g0856	832	Pfam	Protein tyrosine and serine/threonine kinase	193	289	IPR001245	GO:0004672\|GO:0006468
	Mibi10g0856	832	Gene3D	Transferase(Phosphotransferase) domain 1	598	645	-	-
	Mibi10g0856	832	SUPERFAMILY	Protein kinase-like (PK-like)	536	642	IPR011009	-
	Mibi10g0856	832	SUPERFAMILY	Protein kinase-like (PK-like)	189	290	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi10g0856	Mibi-ChrMibi10	25623727	25631901	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi10g0856	644	721	Receptor kinase-like Gene Family	AT1G25390	43.590	1.92e-13	72.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Mibi10g0856		PK_Tyr_Ser-Thr	2.6e-16	CL0016