Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0854 ATGTTCGCTGACCATGTGTCTTCCCTATCTTCTGCTTCTGGAGAGTGCCCTCCTTACTTTGAGTGTGGGAATCTGGGCAATCTCTCATTCCCTTTAACCACTCCACAACGCAAACACTGTGGAATGTTACAGATTCATGGCTGTGAAGATCTCATAGCTGAAAAAATTGTATACTTTGGAGAAAAGAAGTTTCAAGTGACAAGAAAAGACTTATTCAACATGAATTCCATGGCTTTCCTTTCTGATCCATTCACTTTCACAGCTTCCGAATTCCCCGTTACCACTTACCTCTCTCATGACTGTTTCCAATGTTCTCATCACAATAAAGGTATATGCCTCCTCAACAGCACCGGAGGATTCTACTGCCCCAAATTCAAAGGTTTGGGAGTGGGATTTCTAATTCTGATATTAGCATTGGTGGTGATCATCTTCAAACTCTACAAACAGAAACAGAGTGATCTGTCCCATGTCAGGCTTCGTTCAACGAATCAATACCCAAGTAATGAACCAGACCCAGCCAATGGAAGACTCTTCTTTGGAGTTCCAATTTTCTCTTATAAAGAACTTCAAGATGCTACCAATAACTTCAACCCCTCCAACAAACTCGGAGACGGAGGCTTCGGCTCTGTTTACTATGGGAAGCTTCAAGATGGGCGTGAAGTTGCAGTGAAGCACCTATTCAACCATAACTACAAGAGACTAGAGCAGTTCATGACAGAAGTTGAGATACTCACTCGTTTGCGTCACAAGAACCTTGGCTCCCTCTATGGCTGCACTTCTCGCCAAAGCCGTGAGATTCTCCTTGTCTATGAATACATCCCAAATTGCACCCTTGCCAGTCATCTCATGGGCGGCTCTGCAAATCCTGCTTTGCTCACATGGTCTCTTCGAGTCAAAATCGCCATAGAAACTGCCACTGCTTTGGCTTACCTTCATGCCTCTGGCATCATTCATCGTAACTTTTGGGGTTGTGGTTATGGAGTTGGTATCTTCCAACTGTTGAAGGAAATTAAGGGTGAGAAAGGAGAAGGTGGAGAAGCAGAGGAAGATCATAAAGCTAAAGTGATGAGTTCAATAAGATATGATGAGGCAAAGTTGTTCAAGTCATCGTCTTCACCAAATAATGTCACTGTGAAATGGAGCAGTGAATGTACTGCTAATTGCAACGTTTAA 1173 0.4331 MFADHVSSLSSASGECPPYFECGNLGNLSFPLTTPQRKHCGMLQIHGCEDLIAEKIVYFGEKKFQVTRKDLFNMNSMAFLSDPFTFTASEFPVTTYLSHDCFQCSHHNKGICLLNSTGGFYCPKFKGLGVGFLILILALVVIIFKLYKQKQSDLSHVRLRSTNQYPSNEPDPANGRLFFGVPIFSYKELQDATNNFNPSNKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRLEQFMTEVEILTRLRHKNLGSLYGCTSRQSREILLVYEYIPNCTLASHLMGGSANPALLTWSLRVKIAIETATALAYLHASGIIHRNFWGCGYGVGIFQLLKEIKGEKGEGGEAEEDHKAKVMSSIRYDEAKLFKSSSSPNNVTVKWSSECTANCNV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0854 390 Gene3D Phosphorylase Kinase; domain 1 174 272 - -
Mibi10g0854 390 ProSiteProfiles Protein kinase domain profile. 196 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0854 390 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 85 320 IPR044652 GO:0004672
Mibi10g0854 390 Gene3D Transferase(Phosphotransferase) domain 1 273 321 - -
Mibi10g0854 390 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Mibi10g0854 390 SUPERFAMILY Protein kinase-like (PK-like) 176 320 IPR011009 -
Mibi10g0854 390 Pfam Protein tyrosine and serine/threonine kinase 199 320 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0854 Mibi-ChrMibi10 25588053 25590061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0854 91 320 Receptor kinase-like Gene Family AT1G25390 51.822 4.63e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0854 PK_Tyr_Ser-Thr 7.1e-21 CL0016