Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0848 ATGGTTCTACGTTCTTATTTGTTGGCCATTTTCTTCTTGTTCTTGTTGGATGACAAAGTGCTTGCTGTAGCTTCTTCTGCTTCTGGTGGGGAGTGCCCACTTTTCTTTGAGTGTGGGAATCTGGGCAGGATCTGGTCCCCTTTTACCACCCCACAACGCAAAGACTGCGGAATTATGCAGATTCATGGATGTGAAGATGAACACCCCAACGCTACAAAATCTGTGCGCCTGGGGAAAAAGATGTTTCAAGTCAAGTCAATAGACTACAGTTTCAAAACCGTGGTTTTCGTTAGAGACACAGGTTTGGAGGCAAGTTTGGGAAATCAAAGCTGTGATGCGTTGCGCTGGAATATTACTACTCTACCTCCCACCTCACCCTTGGGTTCCTTTCATATCTTTGCAAATATAACCTTGTACAAATGTAATAGTTCCCTCAGTTCTAATTACTCCCTTCCAATGCAATTCTTGAACTATACAGGGTGTGGTAAGAGTAATAATGAGACCATCTTCTTCCGATCTCAAAATCAAGATGATCTTCCGCCTTCTTTGGCAACATGTTCAATGGTTCAGGTTCCTATTAATACGCTGGCTTTCTCCCCTGATCCCTTCACATTCATAGCTTCTGAATTCCCCATTAACTTTCAGTTCTCTGAGGCATGTGGTCCATGTTTTTTGGATAAAAGATCATGCCTGCCCAACAGAACCGGTGGAGTTTATTGTTCCAAGTTCAAATGGAAGCTTCAAGACAGACGTGAAGTTGCAGTGAAACACCTATTCAACCACAACTACAAGAAAGTAGAACAGTTCATGACAGAAGTTGAGATCCTCACTTGTTTGCGTCACAAGAATCTTGTCTCCCTCTATGGCTGCACTTCGCGTCAAAGCCGTGAGCTCCTCCTTGTCTATGAATACATCTCAAAGGGCACCCTTGCAAACCATCTCAGAGGCAGCTCTGCGGAACTGGCATTGCTCACATGGCCTCTACGCATTAAAATTGCTATAGAAACTGCCACTGCTTTGGCTTACCTTCATGCCTCTGGCATCATCCATCGTGATGTCAAAACCAACAACATTCTCCTTGATGATGATTTCGGTGTTAAGGTTGCCGATTTTGGGCTTTCTAGGTTGTTCCCTGATGATGCATCGCATGTGTCTACAGCTCCACAAGGAACACCGGGTTATCTCGATCCTGAATATTACTTTTGCTTTAGGCTGACCGATAAAAGTGATGTTTATAGTTTCGGGGTTGTACTTATGGAGTTGGTATCTTCAATGCCAGCTGTTGATATGGGAAGGAATAAAGATGAGATTACGTTGGGGAATATGGCACTGAGGAAGATCCAGAGGAATGAATTCGATGAGATGGTGGATCCATGTTTGGGGATAGAGAAGGATAGTGAAGTGAAGAAGAAGGTGGTTGCTTTGGGGGAATTGGCATTTCAATGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAGCGGTTTTGAAGGAAATTGAGGGTACAAAAGAAGAAGGTGGAGAAGCAGAAGAAGATCATAAAGCTACAGTGAAGAGGTCAATAAGATATGATGAGGCAAAGCTGTTCAAGTCATCGTCTTCACCAAATAATGTCACTGTAAAGTGGAGCAGTGAATGTGCTCCTAATTGCAGTGTTTGA 1671 0.4339 MVLRSYLLAIFFLFLLDDKVLAVASSASGGECPLFFECGNLGRIWSPFTTPQRKDCGIMQIHGCEDEHPNATKSVRLGKKMFQVKSIDYSFKTVVFVRDTGLEASLGNQSCDALRWNITTLPPTSPLGSFHIFANITLYKCNSSLSSNYSLPMQFLNYTGCGKSNNETIFFRSQNQDDLPPSLATCSMVQVPINTLAFSPDPFTFIASEFPINFQFSEACGPCFLDKRSCLPNRTGGVYCSKFKWKLQDRREVAVKHLFNHNYKKVEQFMTEVEILTCLRHKNLVSLYGCTSRQSRELLLVYEYISKGTLANHLRGSSAELALLTWPLRIKIAIETATALAYLHASGIIHRDVKTNNILLDDDFGVKVADFGLSRLFPDDASHVSTAPQGTPGYLDPEYYFCFRLTDKSDVYSFGVVLMELVSSMPAVDMGRNKDEITLGNMALRKIQRNEFDEMVDPCLGIEKDSEVKKKVVALGELAFQCLQIDKEMRPSIDEVLAVLKEIEGTKEEGGEAEEDHKATVKRSIRYDEAKLFKSSSSPNNVTVKWSSECAPNCSV 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0848 556 Gene3D Transferase(Phosphotransferase) domain 1 306 516 - -
Mibi10g0848 556 ProSiteProfiles Protein kinase domain profile. 224 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0848 556 SMART serkin_6 236 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0848 556 Pfam Protein tyrosine and serine/threonine kinase 238 498 IPR001245 GO:0004672|GO:0006468
Mibi10g0848 556 SUPERFAMILY Protein kinase-like (PK-like) 236 502 IPR011009 -
Mibi10g0848 556 Gene3D Phosphorylase Kinase; domain 1 235 305 - -
Mibi10g0848 556 FunFam Wall-associated receptor kinase-like 20 305 513 - -
Mibi10g0848 556 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 243 547 IPR044652 GO:0004672
Mibi10g0848 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Mibi10g0848 556 PRINTS Tyrosine kinase catalytic domain signature 409 431 IPR001245 GO:0004672|GO:0006468
Mibi10g0848 556 PRINTS Tyrosine kinase catalytic domain signature 342 360 IPR001245 GO:0004672|GO:0006468
Mibi10g0848 556 PRINTS Tyrosine kinase catalytic domain signature 302 315 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0848 Mibi-ChrMibi10 25477510 25479878 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0848 237 556 Receptor kinase-like Gene Family AT1G25390 55.657 1.82e-115 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0848 PK_Tyr_Ser-Thr 2.4e-43 CL0016