Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0842 ATGGTTCTACCTTCTAATTTGTTGGTCTTTTTCTTCTTCTTGCTCTCGTTGGATAACCAAGTGCTTCCTGTATCTTCTTCTACTTCTGGTAGAGAGTGCCCACCTTTCTTTGAGTGTGGGAATATGGGCAGCCTCGGGTTCCCTTTAACCACTTCACAACGCAAACACTGTGGAATAATGCAGATTCATGGCTGTGAAGATGAACACCCCAACGCTAAAAAATCTGTGTACTTTGGGAAAAAGATGTTTCAAGTTACGTCAATAGAAAACAATCTCATCAAAACTGTGGTTTTTGTTAGAGACATAGATTTGGAGAAGTGTTTGGAAAATCAAAGCTGTGATGCATTGAGCTGGAACATTACTACTCCACCTCCCACCTCACCCTTGGGTTCCTTTCATATCTTGCCAAATATAACCTTGTACAAATGTAATAGTTCCCTCAGTCATAATCACTCCCTTCCAAAGAAATTCTTGAATTATACAGGGTGTGGTAAGACTTATGCCTGCTCAACGGAACCGGTGGAATTTATTGTTCCAAGTTCAAAGATTGCAGATCAAAATAAAATACGGGGTTGGAAGCTGGGATTGATAACAGGGAAGCTTCAAGACGGACGTGAAGTTGCAGTGAAACACCTATTCAACCACAACTACAAGAAAGTAGAACAGTTCATGACAGAAGTTGAGATCCTCACTCGTTTGCGTCACAAGAATCTTGTCTCCCTCTATGGCTGCACTTCACATCGAAGCCGTGAGCTCCTCCTTGTCTATGAATATATCTCAAATGGCACCCTTGCCAGCCATCTCAGTGGCAGCTCTACGAAACCGCCATTGCTCACATGGCCTCTACGCATTAAAATTGCTATAGAAACTGCCACTGCTTTGGCTTACCTTCATGCCTCTGGCATCATCCATCGCGATTTGGTATCTTCAATGCCAGTTGTTGATATGGGAAGGAATAAAGATGAGATTACGTTGGGGAATCTGGCGCTGAGGAAGATCCAAAGGAATGAATTCGAAGAGATGGTGGATCCATGTTTGGAGATAGAGAAGGATAGTGAGGTGAAGAAGAAGGTGGTTGCTTTGGGGGAATTGGCATTTCAATGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAAAGGGTTTGAAGGAAATTGAGGGTGAGAAAGAAGAAGGTGGAGAAGGAGAGGAAGAGCATCAAGCTACAGTGAAGAGTCCAATAAGATATGATGAGGCAAAGTTGTTCAAGTATTCGTCTTCACCCAATAATGTCACTATAAAATGGAGCAATGAATGTACTTTTAATTGTAGTGTTTAA 1329 0.4206 MVLPSNLLVFFFFLLSLDNQVLPVSSSTSGRECPPFFECGNMGSLGFPLTTSQRKHCGIMQIHGCEDEHPNAKKSVYFGKKMFQVTSIENNLIKTVVFVRDIDLEKCLENQSCDALSWNITTPPPTSPLGSFHILPNITLYKCNSSLSHNHSLPKKFLNYTGCGKTYACSTEPVEFIVPSSKIADQNKIRGWKLGLITGKLQDGREVAVKHLFNHNYKKVEQFMTEVEILTRLRHKNLVSLYGCTSHRSRELLLVYEYISNGTLASHLSGSSTKPPLLTWPLRIKIAIETATALAYLHASGIIHRDLVSSMPVVDMGRNKDEITLGNLALRKIQRNEFEEMVDPCLEIEKDSEVKKKVVALGELAFQCLQIDKEMRPSIDEVLKGLKEIEGEKEEGGEGEEEHQATVKSPIRYDEAKLFKYSSSPNNVTIKWSNECTFNCSV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0842 442 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 163 IPR044652 GO:0004672
Mibi10g0842 442 Gene3D Phosphorylase Kinase; domain 1 196 259 - -
Mibi10g0842 442 Gene3D Transferase(Phosphotransferase) domain 1 260 312 - -
Mibi10g0842 442 SUPERFAMILY Protein kinase-like (PK-like) 201 384 IPR011009 -
Mibi10g0842 442 Pfam Protein tyrosine and serine/threonine kinase 202 309 IPR001245 GO:0004672|GO:0006468
Mibi10g0842 442 ProSiteProfiles Protein kinase domain profile. 183 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0842 442 Gene3D Transferase(Phosphotransferase) domain 1 313 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0842 Mibi-ChrMibi10 25343678 25346046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0842 297 437 Receptor kinase-like Gene Family AT1G25390 34.932 3.59e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0842 PK_Tyr_Ser-Thr 3e-20 CL0016