Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0840 ATGGTTCTTCCTTTTCATTTGATCCTCTTGTTCCTCTTCTGGTTCTCGTTGGCTAACAATCATGTTCTCTCTCTATCTTCTTCTGCTTCTTCTGAAGGAGATTGCCCACCTTTCTTTAACTGTGGGAGTCTGGGAAACCTCTCCTTCCCTTTCACCACTACACAATACAAACACTGTGGAATGTTGCCTATTTATCACTGTGAAGATCCCAACGCTACAAAAGCTGTGATCTTTGGTAATGAGACTTTTCAGGTGACGAGAATAGGGAGCAAGTTCGACCCTACGGTTTTCGTTAGAGACAAAGATTTACAGAAAAATTTGGAAAACGATGATTGTGATGCATTGTGCTGGAAAATAACTCTTCCTCCCAAATCTCCCTTGGGTTCTTTTAGCATCCTTCCAAGTATAACCATGTACAAATGTAATAGCTCCCTCAATTACACGCTTTCAAAGCAATTCTTGAAGTATACAGGGTGTGGTAAAAGTAATAACCAGACCATCTTCTTCAGATCCCAAGATCATGATCATCCTCCACCTTCTTTAGAAGCATGTCAAAAGGTTCGGCTTCCTGTCAATATGTTGGCTTTCTCTCCTGATCCATTCACTTTCATAGCTTCTGAATTCCCAATCAACATTCTACTTTCTGATGCCTGTTCTCGATGTTCTGATCACAATCAAGGCATTTGCCGCCTCAACCGAACCGGAGGATTTTATTGCTCTGAATTTAAAGGAAAGCTTCAAGATGGGCGTGAAGTTGCAGTGAAGCACCTATTCAACCATAACTACAAGAGAGTAGAGCAGTTCATGACAGAAGTTGAGATCCTCACTCGTTTGCGTCACAAAAACCTTGTCTCCCTCTATGGCTGCACTTCACGTCAAAGCCGTGAGCTTCTACTTGTCTATGAATACATCCCTAACGGAACACTAGCCAGCCACCTCCGTGGTGGCTCTGCGAATCTGGCATTGTTGACATGGCCTCTTCGTATCAAAATCGCCATAGAAACCGCGAGCGCTCTCTCTTACCTTCATGCTTCTGGCATTATTCATCGCGATGTCAAAACCAATAACATTCTTCTTGATGACAATTTCTGTGTCAAGGTTGCTGATTTTGGGCTTTCTAGGTTGTTCCCTGATGATGTGTCGCATGTTTCTACGGCTCCACAAGGAACACCGGGTTATCTTGATCCAGAGTATTACTTTTGCTTTAGATTAACCAATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTCATGGAGTTGATATCTTCAATGCCGGTTGTTGATATGGGAAGGAATAAGGATGAGATTACTTTGGGGGGTCTTGCGGTTAGGAAGATTCAGAGGAACGAATTTGAGGAGATGGTGGATCCATGTTTGGGGATAGAGAAGGATAGTGAGGTGAAGAAGAAGGTGGTTGCTTTGGGGAAATTGGCATTTCAGTGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTCTGAAGGAAATTGAGAGTGAGAATGAAGGTGGTGGAGATGGAGAGGGAGATCGTGAAGCTACTTTGAAGAGCTCAACAAGATATGATGAGGCAAAGTTGTTCAAGTCATCATCTTCACCAAATACTGTCACTGTAAAATGGAGCAGTGAATGCACCATTAATTGCAGCGTTTAA 1668 0.4269 MVLPFHLILLFLFWFSLANNHVLSLSSSASSEGDCPPFFNCGSLGNLSFPFTTTQYKHCGMLPIYHCEDPNATKAVIFGNETFQVTRIGSKFDPTVFVRDKDLQKNLENDDCDALCWKITLPPKSPLGSFSILPSITMYKCNSSLNYTLSKQFLKYTGCGKSNNQTIFFRSQDHDHPPPSLEACQKVRLPVNMLAFSPDPFTFIASEFPINILLSDACSRCSDHNQGICRLNRTGGFYCSEFKGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHKNLVSLYGCTSRQSRELLLVYEYIPNGTLASHLRGGSANLALLTWPLRIKIAIETASALSYLHASGIIHRDVKTNNILLDDNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYYFCFRLTNKSDVYSFGVVLMELISSMPVVDMGRNKDEITLGGLAVRKIQRNEFEEMVDPCLGIEKDSEVKKKVVALGKLAFQCLQIDKEMRPSIDEVLEVLKEIESENEGGGDGEGDREATLKSSTRYDEAKLFKSSSSPNTVTVKWSSECTINCSV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0840 555 Gene3D Phosphorylase Kinase; domain 1 234 304 - -
Mibi10g0840 555 Pfam Protein tyrosine and serine/threonine kinase 245 498 IPR001245 GO:0004672|GO:0006468
Mibi10g0840 555 ProSiteProfiles Protein kinase domain profile. 226 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0840 555 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 235 547 IPR044652 GO:0004672
Mibi10g0840 555 Gene3D Transferase(Phosphotransferase) domain 1 305 508 - -
Mibi10g0840 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Mibi10g0840 555 SMART serkin_6 242 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0840 555 PRINTS Tyrosine kinase catalytic domain signature 341 359 IPR001245 GO:0004672|GO:0006468
Mibi10g0840 555 PRINTS Tyrosine kinase catalytic domain signature 301 314 IPR001245 GO:0004672|GO:0006468
Mibi10g0840 555 PRINTS Tyrosine kinase catalytic domain signature 408 430 IPR001245 GO:0004672|GO:0006468
Mibi10g0840 555 FunFam Wall-associated receptor kinase-like 20 304 510 - -
Mibi10g0840 555 MobiDBLite consensus disorder prediction 503 522 - -
Mibi10g0840 555 SUPERFAMILY Protein kinase-like (PK-like) 242 499 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0840 Mibi-ChrMibi10 25317029 25319284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0840 230 550 Receptor kinase-like Gene Family AT1G25390 58.716 9.57e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0840 PK_Tyr_Ser-Thr 3.2e-44 CL0016