Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0839 ATGTTAGAAAATCAGATTATTCAATACTCTGAGTTTCATTGGAGGATGGCTTCATTTCCTGTGTCTAATGTCATCTTCTTCCTTTCATGTCTTCTTCTACTTCTTGAGACTGTAGAATCAAAGTGTCCAACTTTATTTGACTGTGGATATCTTGGCAAGATCCAATTTCCTTGGACCACCACACAATACAGAGACTGTGGCTTATTTGTAATACAAGGTTGTGACGATCCTAATGTTCCTAAAACTCTGTTAAGCAACAAAGGAACAAAATCCTTTAAGGTTTTAAGTGTTAGTCATACTTTTCCTTCTGAATCCACCATTTTTATCAGAGACATGAATCTCTATGAGCGTTTAAGAAACAGAAGTTGTGACGCTTTTAGTAGTAATTACACTCTTCCTCTCACCTTCCCTTCTCCTTCTTTGGCTTCTTTAAAGATCAGAAACAATGGAACATTCTTCAGATGCAACCGATCAAATCCAATCCCTACGCATCAAATCGATGCTTCTTTCTTCAATTTTATGTGTGGTGACTTTGATATCATTTATCATTTTGCATACTCAAAGAGGAATCAAAGCCATAGCTTATTATTTTCTTCATGTTCTGTTATTCATTTCCCTCACAAAGACCTCCCTAATACCAATGATTCTTTCACTCTTGTAACTTCCATCGTCGTTCTTCAAGTACGATTATCGGATTCTTGTAGTAAGTGTCACTATGACAGATCAGGCCATTGTCATGTTAATTCCAACAGTATCTTTCACTGCCATGGAGAGGATAAGAGCAGGGTTTTGAAGCTGGGACTAGGAATAGGATTAGGTATTGGACTTCCTGCCATTTTGATGATTGCTTGGCTCATAAGACGATGGTATTATCGGCGAAAACATGGTTCTTATGATGGTGGTGGTGGTGATCAATTCGAACCCAGAAACTCCTATTCTGCAGACTTCTCATATTCAGACCCAGAAAATGGCAATATCTACTTAGGAGTTCCTCTGTTCTCTTACAAACAGCTTCAAGAAGCAACAAACAACTTCGACCAAGCAAGAGTACTTGGAGATGGCGGCTTTGGAATTGTTTACTATGGGGAACTTGGAGATGGACGAGAAGTTGCTGTGAAACGTCTATATGAACACAATTACAGAAGAGTTGAACAATTCAGGAATGAAGTTAAGATCCTTGCAAGACTACGCCACAAAAATCTGGTCTCTTTATATGGCTGCACTTCACGCAAAAGCCAAGACCTCCTCCTAGTCTATGAATACATCTCAAATGGCACAGTCGCTAGTCACCTCCATGGTAACAACGACAACAACAACTCGTCAACATGTACTACATCACTATTACCATGGCCAATTCGTCTCAAAATCGCCATTGAAACTGCAAGTGCATTGGTCTACCTTCATGCTTCAGACATCATCCACCGCGACGTAAAGACGAACAACATCCTAGTGGACAACAATTTTAATGTTAAAGTTGCAGACTTTGGACTTTCTAGATTGTTCCCAAATGATGTGTCACATGTTTCCACAGCTCCACAAGGAACACCGGGTTATGTGGATCCAGAATACTACCAATGTTACCAGCTTACGAGTAAGAGTGATGTGTATAGTTTTGGTGTTGTTTTGATTGAGTTGATATCATCTAAACCTGCTGTGGATATAAGTAGGGGTAAGGATGAAGTGAACTTGTCAAGTTTGGCAATGAAGAAGATTCAGGAGAGCGCATTTGTGGAACTAGTGGATCCGTGTCTGAGGATTGAGAAGGATAATGAGGTGAAGAGGATGGTGGTTTCGGTTGGGGAATTGGCGTTTAAGTGTTTGCAAAGAGATAAGGATTCAAGGCCTTCTATGGAAGAGGTTTTGGAGGCTCTGAAGAAGATTCAGAGTAGGAAAGGTGGTGATGAGGTTGAGAATCTTGAAGGTGGTGGTGATAATGTGAATCAATTGGCTTCACCGCCGCCTCCATTGCCACCGTCAATATCACCGGAGAAGGAGGAGGTTGGTATGTTGAAGGTGAAACCACCTCCTTCTCCCATTACTGTGACTGACAAATGGACAAGTGAATCTTCCACCCCTAACTCCAGTGTTTGA 2091 0.4079 MLENQIIQYSEFHWRMASFPVSNVIFFLSCLLLLLETVESKCPTLFDCGYLGKIQFPWTTTQYRDCGLFVIQGCDDPNVPKTLLSNKGTKSFKVLSVSHTFPSESTIFIRDMNLYERLRNRSCDAFSSNYTLPLTFPSPSLASLKIRNNGTFFRCNRSNPIPTHQIDASFFNFMCGDFDIIYHFAYSKRNQSHSLLFSSCSVIHFPHKDLPNTNDSFTLVTSIVVLQVRLSDSCSKCHYDRSGHCHVNSNSIFHCHGEDKSRVLKLGLGIGLGIGLPAILMIAWLIRRWYYRRKHGSYDGGGGDQFEPRNSYSADFSYSDPENGNIYLGVPLFSYKQLQEATNNFDQARVLGDGGFGIVYYGELGDGREVAVKRLYEHNYRRVEQFRNEVKILARLRHKNLVSLYGCTSRKSQDLLLVYEYISNGTVASHLHGNNDNNNSSTCTTSLLPWPIRLKIAIETASALVYLHASDIIHRDVKTNNILVDNNFNVKVADFGLSRLFPNDVSHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSKPAVDISRGKDEVNLSSLAMKKIQESAFVELVDPCLRIEKDNEVKRMVVSVGELAFKCLQRDKDSRPSMEEVLEALKKIQSRKGGDEVENLEGGGDNVNQLASPPPPLPPSISPEKEEVGMLKVKPPPSPITVTDKWTSESSTPNSSV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0839 696 ProSiteProfiles Protein kinase domain profile. 345 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0839 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 690 IPR044652 GO:0004672
Mibi10g0839 696 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Mibi10g0839 696 MobiDBLite consensus disorder prediction 680 696 - -
Mibi10g0839 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Mibi10g0839 696 SMART serkin_6 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0839 696 MobiDBLite consensus disorder prediction 631 696 - -
Mibi10g0839 696 FunFam Wall-associated receptor kinase-like 20 422 637 - -
Mibi10g0839 696 Pfam Protein kinase domain 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0839 696 Gene3D Phosphorylase Kinase; domain 1 320 421 - -
Mibi10g0839 696 SUPERFAMILY Protein kinase-like (PK-like) 325 624 IPR011009 -
Mibi10g0839 696 FunFam receptor-like protein kinase FERONIA 313 421 - -
Mibi10g0839 696 CDD STKc_IRAK 351 627 - -
Mibi10g0839 696 Gene3D Transferase(Phosphotransferase) domain 1 422 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0839 Mibi-ChrMibi10 25298899 25301873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0839 46 696 Receptor kinase-like Gene Family AT1G25390 47.112 3.09e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi10g0839 Pkinase 7.3e-49 CL0016