Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0832 ATGGATTCAAACACTTCAAGCTTTCTTCTGAATTCTTCAAATTTTCACTCTGATTTCTACCAAGGCAAAGAGGAGGAGGAGGATGGTGGCATGATTGATCTGGGACTTAGCCTCAGCACTGTACAACCTGAAACTTATCATACTTCTAGCAACTTTTTAAGTTTGTGGAGATATGATGATGGCCTTATGGATTGGCCACCACAGTCTAATAATCTTAACAATCTCAAGAGCTCAAGCACAACAATGCATTCAAAATCAGTTCCAGAAAACTTTGATGAAGAAATAGAAGGTGTTCAGAGCAATGATAGGTGGGCTTATGTGAAGGTTAATATGGATGGGGTTACAGTAGGCAGAAAAATCTGTGTCCTTGATCATGAAGGCTACCCAAGTCTTTCATACCAGTTAGAGAACATGTTTGGAAGCAAATCTGGTTCTGGTTTGAAGCTGTTTCAATCTGCGTCAGAGTATTTACTGTTCTACAAGGACAGAGAAGATCATTGGAGAACTGTAGGTGATGTCCCATGGAAAGAATTTGTAGAAAGTGTGAAGAGGTTGAGGATTGCCAGAAAGAATGATGCAGCCTAA 585 0.4 MDSNTSSFLLNSSNFHSDFYQGKEEEEDGGMIDLGLSLSTVQPETYHTSSNFLSLWRYDDGLMDWPPQSNNLNNLKSSSTTMHSKSVPENFDEEIEGVQSNDRWAYVKVNMDGVTVGRKICVLDHEGYPSLSYQLENMFGSKSGSGLKLFQSASEYLLFYKDREDHWRTVGDVPWKEFVESVKRLRIARKNDAA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0832 194 ProSiteProfiles PB1 domain profile. 104 192 IPR000270 GO:0005515
Mibi10g0832 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 52 193 IPR003311 GO:0005634|GO:0006355
Mibi10g0832 194 Pfam AUX/IAA family 64 193 IPR033389 -
Mibi10g0832 194 SUPERFAMILY CAD & PB1 domains 103 187 - -
Mibi10g0832 194 Gene3D - 99 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0832 Mibi-ChrMibi10 25151290 25152552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0832 99 187 B3 DNA Binding Superfamily AT1G59750 37.079 2.47e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi10g0832 AUX_IAA 2.1e-25 CL0072