Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0794 ATGGGTTTACAAAACAACCTCCAAGACATCTCTTCTGATTCAATCCCCCTCCTTCTCCTCCTCCACCTCGCCGCGGCCTTCAATTTCCTCCGCTCCCACCTCCTCGCCCTCCTCCACACCCTCGGAATCCCCCGGTCCCACTCCGATCCGCCCTTCGTCGACGACGCCCTCCTCGCCGCCACCGTCGGGTCCGGGCTCGCCCGCCTCGTAATTCTCTCCGACCACCTCAACGCCACCTATGACCTCGTCGCCACCGTAGACGGCGGCGCCGGCGACGGAGAGATCGCGGTTTCCGATTCCTCGATTTGTGTTGTTTGCCGGAATGAGTACAAGGAAGGCGATCAGGTAAGGAGGCTTCCTTGCCGCCATGTTTTCCATAGACGTTGCTTTGATGCTTGGCTTCATCAGCTCAAGTTTAATTGCCCTATTTGCCGGTCGGAGCTCGTCTCCGACGAGCGCGTGGAATTAGCTGGGCGGCGCGTGGGAAGTGAATTGTTGTCTTGGTTCTCTGTTCGGTGA 519 0.5896 MGLQNNLQDISSDSIPLLLLLHLAAAFNFLRSHLLALLHTLGIPRSHSDPPFVDDALLAATVGSGLARLVILSDHLNATYDLVATVDGGAGDGEIAVSDSSICVVCRNEYKEGDQVRRLPCRHVFHRRCFDAWLHQLKFNCPICRSELVSDERVELAGRRVGSELLSWFSVR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0794 172 Pfam Ring finger domain 103 145 IPR001841 -
Mibi10g0794 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 159 IPR013083 -
Mibi10g0794 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 93 153 - -
Mibi10g0794 172 SMART ring_2 103 144 IPR001841 -
Mibi10g0794 172 SUPERFAMILY RING/U-box 102 151 - -
Mibi10g0794 172 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0794 Mibi-ChrMibi10 22604386 22604904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0794 1 171 C3H Transcription Factor Family AT1G15100 47.674 3.63e-40 131