Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0740 ATGAGGAAACCTTTGTGTTATAATAACAAGAAGATGGTTTTGAAAAGAGAAGCTTGGTCCAAACAAGAAGATCAGAAACTCCTTGATTACATCAATAAACATGGTGAGGGTTCCTGGAGTACCGTCCCTCAATCTGCTGGGTTACTTCGCTGCGGCAAAAGTTGTAGGCTGAGATGGATAAATTATTTGAGGCCAGACACTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCCCTCCTAGGCAACCGGTGGTCACTGATAGCCGGAAGATTACCGGGAAGGACGGATAATGAGGTGAAGAACTATTGGAACTCTCATCTGAGAAAAAAGTTTGTAAACAAGGGAATTGATCCTAATAATCATCGGTTCGCTGGAAATCCACCATTAATGTCTGGAACCTCAGCATCATCATTTAACAGCCTTCAATACAACAACAATGCCAAGAACGGTAATGATGAGCCAATTACAAAACCTTATTCTGAGAATAGCTCTAATAATAATAATAATAATAATTGTGACCAACTCTCAGATGCAGCAAGTAGTTTAGAAGAAGAAGAATCATCATTTTGCATACCCGATTTGAACCTTGACCTCACTATGAGCAGTGAAATTATTTCTTCTTCTTCTTCCTCTTCCACTTCACCTCCTCCAGATCCAAATCCAATTCAAGAATATTCTAGAACATCAACTGAACTTTTTCTGTTCAGGTGA 732 0.3934 MRKPLCYNNKKMVLKREAWSKQEDQKLLDYINKHGEGSWSTVPQSAGLLRCGKSCRLRWINYLRPDTKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRKKFVNKGIDPNNHRFAGNPPLMSGTSASSFNSLQYNNNAKNGNDEPITKPYSENSSNNNNNNNCDQLSDAASSLEEEESSFCIPDLNLDLTMSSEIISSSSSSSTSPPPDPNPIQEYSRTSTELFLFR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0740 243 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Mibi10g0740 243 MobiDBLite consensus disorder prediction 123 193 - -
Mibi10g0740 243 MobiDBLite consensus disorder prediction 209 243 - -
Mibi10g0740 243 CDD SANT 18 63 IPR001005 -
Mibi10g0740 243 Gene3D - 13 69 - -
Mibi10g0740 243 CDD SANT 71 114 IPR001005 -
Mibi10g0740 243 FunFam MYB transcription factor 70 131 - -
Mibi10g0740 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mibi10g0740 243 MobiDBLite consensus disorder prediction 133 190 - -
Mibi10g0740 243 Gene3D - 70 131 - -
Mibi10g0740 243 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 205 - -
Mibi10g0740 243 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mibi10g0740 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mibi10g0740 243 SMART sant 15 65 IPR001005 -
Mibi10g0740 243 SMART sant 68 116 IPR001005 -
Mibi10g0740 243 Coils Coil 172 192 - -
Mibi10g0740 243 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mibi10g0740 243 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Mibi10g0740 243 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mibi10g0740 243 FunFam MYB-related transcription factor 15 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0740 Mibi-ChrMibi10 20464084 20465373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0740 2 226 MYB Transcription Factor Family AT4G09460 46.522 1.66e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0740 Myb_DNA-binding 3.5e-15 CL0123