Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0738 ATGAGGAAACCTTTGTGTGGTAATAATAAGATGGTTTTGAACAGGGGAGCTTGGTCCAAACAAGAAGATCAGAAACTCATTGATTACATCAATAAACATGGTGAGGGTTCCTGGCGTACCCTAACTCAATCTGCTGGGTTACTTCGCTGTGGCAAAAGCTGTAGGCTGAGATGGATAAACTATTTGAGGCCAGACACTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGACCTAATCATTAAGCTTCATGCCCTCCTAGGCAACCGGTGGTCATTGATAGCCGGAAGATTACCGGGGAGGACAGATAATGAGGTGAAGAACTATTGGAACTCTCATCTGAGAAAAAAGCTCATGAACAAGGAAATTGATCCGAAAAATCATCAGTTAACTCGAAATCCACCATTAATGTTTGGAAGCTCATCATCAGCGTCATATAATAGCCTGAAAGACAGCCATACCAAGAATGATGACGAGCCAAAACCTTATGCTGATTACAAATCTAATAACAATAATTGTGATCAAGTCTCAGATGCAGCAAGTAGTTTAGAAGAAGAAGAAGAATTATTTAACATACCCGATTTGAACCTTGACCTCACTATGAGCAGTGAAATTATTTCTTCTTCTTCTTCACCCCCTCCAGATCCAAATCCAATTCAAGAATATTCTAGAACATCAACTGAACTTCTTCTGTTCAGGTGA 699 0.3991 MRKPLCGNNKMVLNRGAWSKQEDQKLIDYINKHGEGSWRTLTQSAGLLRCGKSCRLRWINYLRPDTKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRKKLMNKEIDPKNHQLTRNPPLMFGSSSSASYNSLKDSHTKNDDEPKPYADYKSNNNNCDQVSDAASSLEEEEELFNIPDLNLDLTMSSEIISSSSSPPPDPNPIQEYSRTSTELLLFR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0738 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mibi10g0738 232 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mibi10g0738 232 Gene3D - 15 67 - -
Mibi10g0738 232 MobiDBLite consensus disorder prediction 124 174 - -
Mibi10g0738 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi10g0738 232 SMART sant 14 64 IPR001005 -
Mibi10g0738 232 SMART sant 67 115 IPR001005 -
Mibi10g0738 232 MobiDBLite consensus disorder prediction 204 225 - -
Mibi10g0738 232 FunFam MYB-related transcription factor 14 67 - -
Mibi10g0738 232 Coils Coil 165 185 - -
Mibi10g0738 232 MobiDBLite consensus disorder prediction 132 149 - -
Mibi10g0738 232 CDD SANT 17 62 IPR001005 -
Mibi10g0738 232 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Mibi10g0738 232 CDD SANT 70 113 IPR001005 -
Mibi10g0738 232 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi10g0738 232 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mibi10g0738 232 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mibi10g0738 232 FunFam MYB transcription factor 69 130 - -
Mibi10g0738 232 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Mibi10g0738 232 Gene3D - 70 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0738 Mibi-ChrMibi10 20400815 20430952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0738 2 220 MYB Transcription Factor Family AT4G09460 47.186 4.25e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0738 Myb_DNA-binding 1.4e-14 CL0123