Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0675 ATGTCTTGTTCTTCGTCATCATCAAGATCCCTAGTTTCCATGGGCTCATCAGAAAGCTCAACCACAATACTTCAACAACGTCTTCAATTCATTTTGCACAGCCGTACAGAGGGGTGGGTTTACATCATTTTCTGGAAAGCTTGGAAAGAAGAAGAAAGCACTAATAATATTCCTAGGCCCCAAATATTACTAAATTGGGGTGATGGCTATTTCTGTGGAACCAGAGAATCAACCAAATCCAAAGAAAACACTACCGACCACATGGAAAATGAACGACATTCTTTGACTGAGTTGGAATGGTTTTACACAGTATCGTTGACTCGATTTTTCGCAGCCGGTGATGACGTGGTCGGTCGTGCCTTCAGCTCGGCCACACATGTTTGGTTGGCCACGGCCAATGGCGGCGGCGCCAGCGACCAACACGAGTGTGAGAGAGTTCGAGAAGCTTTTGCTCATGGAATCCAAACTCTAGTGTGCATTCCAATTCCTAATGGAGTTCTTGAGCTAGCCTCCACTGATTTAATTCCCCAAGATTGGAGTTTAATCCAATCTGTTAGATCAGTTTTTGAGGTTGACAACTTAGTCTTCAGCCCCAATCATCAACCAAACCCTCTTTCTGAACCTTATCATCATTTCAAGAATGAAGCTCTCAATGAATCTGAAGCTCCTTTTGTACCTTCATCTTCAAATCCTCAGCCAATCAGAAAAAAGGGACGAAACGACGACGTTAAAGCACAAGAGGTAATAATGCCTCTAAACCATGTGGAGGTTGAGAGGCAGAGAAGAGAGAAACTGAATCAAAGATTCTATGCTTTACGTTCTGCTGTTCCTAATGTGTCCAAAATGGACAAAGCTTCTCTTCTTTCTGACGCAGTCACATATATAAATGAGCTCAAGGCTAAAATTGAGGAACTAGAAGCAAAGTTCAAGAGATTAGAAGTGGAAGAAGGTGAGACAATAAAGCATTTTGTCTCGAGATCCGAAGCGAGTTCGCAGGTCGGAGTTGAAGTTAATATGGTGGGGACGGAGGCGATGATAAGGGTACAGTGTCTGGATGTGAATCACCCGGCTGCTAGGTTGATGGATGCTTTGAGACAACTCGATTTTCATGTTCATCATGCTAGTGTATCAAGAATCAACGACCTAATGCTTCAAGATGTCGTCGTTCGGGTCCCCAATAATTTCATGACTGCCCAGGACATGAAAATTGCCATTCTTCAACGTTTACAAAACTGA 1236 0.432 MSCSSSSSRSLVSMGSSESSTTILQQRLQFILHSRTEGWVYIIFWKAWKEEESTNNIPRPQILLNWGDGYFCGTRESTKSKENTTDHMENERHSLTELEWFYTVSLTRFFAAGDDVVGRAFSSATHVWLATANGGGASDQHECERVREAFAHGIQTLVCIPIPNGVLELASTDLIPQDWSLIQSVRSVFEVDNLVFSPNHQPNPLSEPYHHFKNEALNESEAPFVPSSSNPQPIRKKGRNDDVKAQEVIMPLNHVEVERQRREKLNQRFYALRSAVPNVSKMDKASLLSDAVTYINELKAKIEELEAKFKRLEVEEGETIKHFVSRSEASSQVGVEVNMVGTEAMIRVQCLDVNHPAARLMDALRQLDFHVHHASVSRINDLMLQDVVVRVPNNFMTAQDMKIAILQRLQN 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0675 411 MobiDBLite consensus disorder prediction 221 241 - -
Mibi10g0675 411 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 249 298 IPR011598 GO:0046983
Mibi10g0675 411 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 317 IPR036638 GO:0046983
Mibi10g0675 411 Coils Coil 288 315 - -
Mibi10g0675 411 Gene3D - 251 315 IPR036638 GO:0046983
Mibi10g0675 411 Pfam Helix-loop-helix DNA-binding domain 253 298 IPR011598 GO:0046983
Mibi10g0675 411 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 24 189 IPR025610 -
Mibi10g0675 411 PANTHER MYC 14 408 IPR045084 GO:0003700|GO:0006355
Mibi10g0675 411 SMART finulus 255 304 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0675 Mibi-ChrMibi10 16543789 16545024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0675 16 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 35.322 2.12e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0675 bHLH-MYC_N 1.6e-40 CL0161