Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0658 ATGGAAAACGTTGAATCCGATGAACCCAAAAAGAAGAGGCCGCATTTGAGTTCAGTATCCTCCCCCATGGGGCGGAATTCAACCAACCCATCGACCAACAACAAATGTGCTGATGTGGGAGTCTTGCAGTTTCAGAACCAGCAGCTTGTTCACCAGATAGACCTCCAAAAACAGGCATTGCATGGTCTTGAAGCAAAAATTGGAGATTTAAAATACAAGCAAAATTCCTATGATGACATGATAATTGCAGTAAACGAACTCTGGAGTCAGTTTGTAGATGATCTGATCCTTCTAGGAATACGAGCTGGTGGAGGCCAAAATGCATTAAAAACTTTGGAGCAGCCAGGTAATCCTCAAGATTCACTTTCTCTGTGTCCGGTGGAGGATATCTTCCTTTCCAGATTAATACAGAAAGATTTCATTGAAGCCAACGATCATGATGAGGTCATTAACTTTGTTGAGGAAGCACTTGCTCTGCGTCAGTCATCTACCAGGGAGTTATTGAAACTTCTTGAAGATGCCATTGATGCTCAGATTGAAAGAACTTACTGTATTACCCAGGGTTTGGAAGGGTCAACTTCAGAAGATGCTATCATTCAAATGTCTAAGATTGATGAAATGATGAAAGAGGAGGCAAACAATTTAAGAGAAGTAATCAATGCTCTCCATGCCAAGCATAAAGATTATGCTGTTGCTATTGAAAACTATATCAGCTGCCACTTAAGGGATCAATCTGAGATTAAACGCTTAGCAGGTGAAATTGATGAAAGCATGTCTGAACTTGAAGAGAGTCGGAGAAAATTAGTCAATCTGAAAATGCAGAAAGATGTGGCAATAGGGATGCAGCCGCCTGGTTCAGATGCAGTTAATGGGACTTTGTCTCCTGAAAAACCTTCAGACAAGACAATGGGTCTGCAGGAGTTGAAAGATTCAATTGAAGAAGCAAAGATAGTGGCAGCTGATCGGCTTTCAGAACTTCAAGAAGCACAGGAAGAAAATCTGACCTTGAGAGGGCATTTGCAAGATCTTCAGAATGAATTGACTGATGACAAATATGTATATTCGTCCCGATTATATTCATTGGCTAATGATCAACTTCAACATTGGAATGCTGAATTGGAGCGGTATAAAGCTTTGACAGAGTCTCTGCAGGCTGAAAGGGTCCATGTCATGAAACGGGAAAAGGAACTGAACTCAAAATTGGAGTCTGCGGATACTGCAAGGCTTACAGTTGACAATTCTGATTGTAGGATTGAAGAGCTAGACCTTCAGTTGCAAAAGTGTACTATTGAAAAGAATGACATTGAAATAGAGATGGAAGAAGCGATACAAGATACTGGGAGAAAAGATATTAATTCCGAGTTTCATGTCATGGCTTCAGCCTTATCTAAGGAAATGGGTATGATGGAAGCTCAATTGAAACGATGGAAAGATGCAGCTCATGAGGCAGTTTCTTTACGTGAGAAAGCACATTCATTAAGATCTTTGTTAAATGGGAAGTCAAGTGAAATAAAAAGCTTAGCAAACAAATGTTCTGAGCAGGCTGCGGAGATAAAGTCTTTAAAAACATTGATTGAAACGCTGCAGAAGGAAAAGGTGGAATTACAATTCTTTCTGGACTTGCATGGACAGGAGAATCATGAAAAAAGAGGTTTGGTAGAAATCAGAGAATCAGAAAGTAAAGCCCTCGCTCAAGCTGAAGTACTGAAAAATGCTTTAGACGAGCATAGTTTAGAGTTGAGGGTAAAAGCTGCCAATGAAGCTGAAGCTGCTTATGAACAAAGGCTTACTACAGCAGAAGCTGAAATAGAGGACCTAAGGGCCAAACTGGAAGCTTCCGAAAGAGATATTCTGGAGCTGACTGAGGCTATTAAAGTCAAAGATGCCGAGTCAGAGGCTTATATATCTGAAATTGAGACTATTGGACAAGCATATGAAGATATGCAAACGCAGAACAAACATCTATTGCATCAGGTGACTGAGAGGGATGACTATAATATTAAGCTTGTATCAGAGAGTGTAAAGACAAAACAGGTGCATAGCGTTTTACTTTCTGAAAAGCAGGCCTTAGCAAAGCAGCTTCAACAAATCAACGCTTCAATAGTAACTTTAAAGATGAGGATAACACACAGTGAAGACCAGATGAATGCTCTTTTATCAGAAGCCACTAAATCTACTCAAGAGGAAAAACACCTTGCAATTACCCTGGAATCTGCAAAGTGGGAATTGGCTGATGCTGAAAAGGAGTTGAAATGGCTTAAGTCTGCTGTCACTTCTTCTGAGAAGGAGTATGATCAAATTCAGAAAGACTTGGAAGCCACCCAAATTGAGTTGGATACTGAAAGGAGTTCCAAAAATAAGCTTGAGGAAGAACTCAGGGAATTGAACAACAAAATTGGGGAGCTGAGTTCCGAAACGGGAGAGACAGCAATAGAAAAACTACAAGATGAAATTAGGGTTTGCAAGAATATGATCAAGTGCACTGTCTGTTCTGATCGTCCCAAGGAGGTCGTGATTGTGAAGTGTTATCATCTGTTCTGCAATCCTTGTATTCAAAGGAACTTGGAGCTCCGTCATCGCAAGTGTCCTGCCTGTGGGACTGCTTTCGGTCAGAGTGATGTTCGGTTTGTAAAAATATGA 2640 0.4061 MENVESDEPKKKRPHLSSVSSPMGRNSTNPSTNNKCADVGVLQFQNQQLVHQIDLQKQALHGLEAKIGDLKYKQNSYDDMIIAVNELWSQFVDDLILLGIRAGGGQNALKTLEQPGNPQDSLSLCPVEDIFLSRLIQKDFIEANDHDEVINFVEEALALRQSSTRELLKLLEDAIDAQIERTYCITQGLEGSTSEDAIIQMSKIDEMMKEEANNLREVINALHAKHKDYAVAIENYISCHLRDQSEIKRLAGEIDESMSELEESRRKLVNLKMQKDVAIGMQPPGSDAVNGTLSPEKPSDKTMGLQELKDSIEEAKIVAADRLSELQEAQEENLTLRGHLQDLQNELTDDKYVYSSRLYSLANDQLQHWNAELERYKALTESLQAERVHVMKREKELNSKLESADTARLTVDNSDCRIEELDLQLQKCTIEKNDIEIEMEEAIQDTGRKDINSEFHVMASALSKEMGMMEAQLKRWKDAAHEAVSLREKAHSLRSLLNGKSSEIKSLANKCSEQAAEIKSLKTLIETLQKEKVELQFFLDLHGQENHEKRGLVEIRESESKALAQAEVLKNALDEHSLELRVKAANEAEAAYEQRLTTAEAEIEDLRAKLEASERDILELTEAIKVKDAESEAYISEIETIGQAYEDMQTQNKHLLHQVTERDDYNIKLVSESVKTKQVHSVLLSEKQALAKQLQQINASIVTLKMRITHSEDQMNALLSEATKSTQEEKHLAITLESAKWELADAEKELKWLKSAVTSSEKEYDQIQKDLEATQIELDTERSSKNKLEEELRELNNKIGELSSETGETAIEKLQDEIRVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0658 879 Coils Coil 359 386 - -
Mibi10g0658 879 ProSiteProfiles Zinc finger RING-type profile. 827 865 IPR001841 -
Mibi10g0658 879 SUPERFAMILY RING/U-box 826 870 - -
Mibi10g0658 879 Coils Coil 46 66 - -
Mibi10g0658 879 PANTHER RING FINGER PROTEIN-RELATED 6 879 IPR013956 GO:0004842|GO:0010390
Mibi10g0658 879 SMART ring_2 827 865 IPR001841 -
Mibi10g0658 879 MobiDBLite consensus disorder prediction 19 34 - -
Mibi10g0658 879 Coils Coil 582 630 - -
Mibi10g0658 879 Coils Coil 312 346 - -
Mibi10g0658 879 MobiDBLite consensus disorder prediction 1 15 - -
Mibi10g0658 879 ProSitePatterns Zinc finger RING-type signature. 842 851 IPR017907 -
Mibi10g0658 879 Coils Coil 511 531 - -
Mibi10g0658 879 CDD RING-HC_BRE1_like 825 866 - -
Mibi10g0658 879 Gene3D - 683 824 - -
Mibi10g0658 879 Pfam Zinc finger, C3HC4 type (RING finger) 826 868 - -
Mibi10g0658 879 Coils Coil 736 805 - -
Mibi10g0658 879 MobiDBLite consensus disorder prediction 280 301 - -
Mibi10g0658 879 MobiDBLite consensus disorder prediction 1 34 - -
Mibi10g0658 879 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 825 877 IPR013083 -
Mibi10g0658 879 Coils Coil 418 445 - -
Mibi10g0658 879 Coils Coil 247 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0658 Mibi-ChrMibi10 16050549 16071181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0658 801 874 RAD5 or RAD16-like Gene Family AT5G05130 28.916 3.50e-08 55.5