Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi10g0646 | ATGGGAAATTGCAACAGTATAGCCTCCACTCATAACCAACCACAAAACTCCAACAACAACAATGGCATCACCATCCTCCCTCCAAATTCCAACCCATCTCGCCCTCCTCCTCCACCAAAATCACACCTTTCTTCTTCCGTTGGTCGCGTCCTTGGCCGACCCATGGAAGATGTACGTTCCACCTATATCTTCGGCCGCGAACTCGGTCGTGGCCAATTTGGTGTGACCTATTTGGTTACACACAAAATCACTAAGGAACAATTCGCTTGTAAATCAATTGCTACTCGGAAATTGATTAATCGTGATGATTTGGAGGATATTCGTCGTGAGGTTCAGATTATGCATCACCTAACTGGGCATCGGAATATTGTGGAGCTTAAGGGAGCTTATGAGGATCGTCATTCTGTGAATTTAGTTATGGAGCTTTGTGCTGGTGGTGAGCTTTTTGATAGGATAATTGCTAAGGGGCATTATTCGGAGCGTGCTGCTGCTGATTTGTGTAGGCAGATTGTGATGGTTGTGCATGATTGTCATACCTTGGGTGTTATGCATAGAGATTTGAAGCCTGAGAATTTCTTGCTTCTTAGTAAGGATGAGAGTTCGCCTCTTAAGGCAACTGATTTTGGTCTCTCTGTTTTCTTCAAGCCAGGAGATGTATTTAAAGATCTGGTTGGGAGTGCATATTATGTTGCTCCTGAGGTATTGCGTAGAAGCTATGGACCTGAAGCTGATATTTGGAGTGCGGGTGTTATATTATACATTCTTCTCTGCGGTGTCCCACCCTTCTGGGCAGAAAATGAACAGGGTATCTTCAATTCAATTCTTCATGGGCATATTGATTTTGCATCAGATCCTTGGCCTTCCATTTCAAGTAGTGCCAAAAACCTCATCAAAAAGATGCTTCAAGCTAACCCAAAAGAAAGGCTTTCGGCAGAGGAAGTCCTTAACCATCCTTGGATGAGAGAAGATGGGGATGCTTCGGATAAGCCTCTTGATATTGCTGTCCTAAGCAGAATGAAACAATTCCAGGCAATGAACAAGCTAAAGAAAGTAGCTTTGAAGGTAATTGCAGAAAATCTCTCTGAAGAGGAAATCATTGGCTTAAAGGAAATGTTCAAATCCATGGACACAGATAACAGTGGAACAATCACCTATGATGAGTTAAAAGCTGGTCTCCACAAACTAGGCAGTAAACTTTCTGAGTCTGAAATAAGGCAGTTGATGGAAGCGGCTGATGTAGATGGAAATGGAGCCATTGATTACATTGAGTTTATATCGGCAACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATACAACGCCTTTGAATATTTTGACAAGGATAAGAGCGGGTATATCACGAAGGAAGAGTTGGAATCTGCCCTTAGGAAGTATAATATGGGTGATGAGAAAACTATAAAGGAGATCATTGCTGAAGTTGACTCAGACAATGATGGAAAAATTAACTACGAAGAGTTTGCAGCCATGATGAGGAAAGGCAACCCGGACTTTGTAAACAACAGACGTCGCTAA | 1539 | 0.4256 | MGNCNSIASTHNQPQNSNNNNGITILPPNSNPSRPPPPPKSHLSSSVGRVLGRPMEDVRSTYIFGRELGRGQFGVTYLVTHKITKEQFACKSIATRKLINRDDLEDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAADLCRQIVMVVHDCHTLGVMHRDLKPENFLLLSKDESSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLCGVPPFWAENEQGIFNSILHGHIDFASDPWPSISSSAKNLIKKMLQANPKERLSAEEVLNHPWMREDGDASDKPLDIAVLSRMKQFQAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYDELKAGLHKLGSKLSESEIRQLMEAADVDGNGAIDYIEFISATMHMNRMEREDHLYNAFEYFDKDKSGYITKEELESALRKYNMGDEKTIKEIIAEVDSDNDGKINYEEFAAMMRKGNPDFVNNRRR | 512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi10g0646 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 471 | 505 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Mibi10g0646 | 512 | SUPERFAMILY | EF-hand | 359 | 500 | IPR011992 | - | |
| Mibi10g0646 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 331 | IPR011009 | - | |
| Mibi10g0646 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 483 | 495 | IPR018247 | - | |
| Mibi10g0646 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 376 | 388 | IPR018247 | - | |
| Mibi10g0646 | 512 | Gene3D | - | 329 | 503 | - | - | |
| Mibi10g0646 | 512 | FunFam | Calcium-dependent protein kinase 1 | 328 | 503 | - | - | |
| Mibi10g0646 | 512 | SMART | serkin_6 | 62 | 320 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi10g0646 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 363 | 398 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | ProSitePatterns | Protein kinases ATP-binding region signature. | 68 | 91 | IPR017441 | GO:0005524 | |
| Mibi10g0646 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 399 | 434 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 182 | 194 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi10g0646 | 512 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Mibi10g0646 | 512 | FunFam | calcium-dependent protein kinase 1 | 148 | 327 | - | - | |
| Mibi10g0646 | 512 | CDD | STKc_CAMK | 62 | 319 | - | - | |
| Mibi10g0646 | 512 | FunFam | Calcium-dependent protein kinase 1 | 64 | 147 | - | - | |
| Mibi10g0646 | 512 | Pfam | Protein kinase domain | 64 | 320 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi10g0646 | 512 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 57 | 495 | - | - | |
| Mibi10g0646 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 64 | 147 | - | - | |
| Mibi10g0646 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 412 | 424 | IPR018247 | - | |
| Mibi10g0646 | 512 | ProSitePatterns | EF-hand calcium-binding domain. | 448 | 460 | IPR018247 | - | |
| Mibi10g0646 | 512 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 435 | 470 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | ProSiteProfiles | Protein kinase domain profile. | 62 | 320 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi10g0646 | 512 | SMART | efh_1 | 403 | 431 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | SMART | efh_1 | 367 | 395 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | SMART | efh_1 | 474 | 502 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | SMART | efh_1 | 439 | 467 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | Pfam | EF-hand domain pair | 368 | 428 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | Pfam | EF-hand domain pair | 438 | 500 | IPR002048 | GO:0005509 | |
| Mibi10g0646 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 148 | 328 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi10g0646 | Mibi-ChrMibi10 | 15333222 | 15343430 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi10g0646 | 48 | 512 | EF-hand Containing Proteins | AT4G23650 | 80.430 | 0.0 | 808 |
Transcription factors information