Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0645 ATGGAACCGAAAGGGTTGTTGATCTCTGCATTAAGTGTTGGTGTTGGAGTTGGGGTGGGCATTGGATTGGCTTCTGGGCAAAGCGTAAGCAAATGGGGTGGAGCTAATAATTCTTCCTCTAATGCCCTTACTGTTGAAAAGATTGAGCAAGAAATGCTTCGTTTAGTTGTTGATGGCAGAGAAACCAATGTCACCTTTGATCAGTTTCCTTATTATCTCAGTGAGCAGACACGCGTGTTGCTGACAAGTGCTGCTTATGTCCATTTAAAACATGCCGAGGTCTCTAAATATACTCGTAATCTTTCTCCGGCGAGCCGGACGATTTTACTCTCTGGACCAGCAGAACTTTACCAACAGGTTCTTGCCAAAGCTTTAGCTCATTATTTTGAAGCAAAGTTGCTTCTGTTAGATTTAACCGACTTTTCATTGAAGATTCAAAGTAGATATGGTTCTGGCAACAAAGAATCCGTTTTTAAAAGGTCCACTTCAGAGACAACTTTGGAGAGACTATCCGGCTTATTCGGGTCATTTTCAATCTTTCCACAGAAGGAGGAGCCTAAAGGAAAAATTATCAGACAAAACAGTGGAGTGGACCTCAGATCAATGGGTAATGACACGTCTTGCAATCCTCCAAAAATTCGTCGGAATGCTTCTGCTACGAATATCAGTAGCCTTGCCTTGCAAAATGCTCCTAATCCAGGTTCTCTTAGGCGCACGGCCAGTTGGTCTTTTGATGAAAAACTTCTTATACAATCTCTTTACAAGGTCCTTAGTTATGTGTCGAAAACTTATCCCATAGTGCTATATCTGCGGGATGTTGAACATTTGCTGAACAGATCACAAAGGGCCTACAAGTTGTTACAGAAAATGTTGGAGAAACTATCTGGACCTGTTCTGATACTCGGTTCTCGAGTTTTAGATCCTGGTAATGACTACAGTGAGGTAGACGAGAAACTTGCTTCAGTCTTCCCATACAATATTGAAATTAGACCCCCAGATGATGAATCACATCTGGTAAGCTGGAAGACTCAACTGGAAGAAGATATGAAAAAGATACAGGTTCAGGATAACAAAAACCATATTTTGGAAGTACTTTCAGCAAATGATCTTGATTGCGACGATCTAGATTCCATCTGTGTGGCAGACACAATGGTTCTTAGTAATTACATCGAAGAGATTGTTGTGTCAGCAATTTCTTACCACTTAATGAAAAACAAAGACCCAGAATACAGAAATGGGAAACTTGTTATTTCATGCAACAGTTTATCTCAAGCGTTGGGTATATTCCAAGAGGGAAAATCCCATGGAAGAGATACATTAAAATTAGAAGCTCAAGATGTAAAATCTGAGAAGGAAAGAGAGGAGGTTGGGGCTGTGAAACCTGAAGCCAAGCCTGATAACAAATCTCCACAAAAGAAAACTGAAGGAGCAGCAACAGCTTCTGTGGCGAAAGCTGAGAATGTAACTTCAGCTCCTCCAGAACCCAAAGTTTCTGAACCTCCTCCAGATAATGAGTTTGAGAAGAGAATAAGGCCAGAGGTAATACCGGCAAATGAAATTAACGTGACATTTGATGATATTGGTGCCTTAGAAGAGACCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCACTACGAAGGCCGGACCTTTTCACTGGAGGCCTTTTGAAGCCTTGCAGAGGAATATTGCTGTTTGGTCCACCTGGCACAGGAAAGACAATGCTGGCAAAGGCCATAGCAAGGGAAGCTGGAGCAAGCTTCATCAATGTATCTATGTCTACAATAACTTCCAAATGGTTTGGTGAAGACGAAAAGAATGTTCGAGCTTTGTTCACATTGGCAGCTAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTCGGAGAGCATGAAGCAATGAGGAAAATAAAGAACGAATTCATGACTCACTGGGATGGCCTTATGACAAAACCAGAACAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCCTTTGATCTAGATGAAGCCATCATCAGGAGATTTGAAAGAAGAATTATGGTAGGGCTTCCATCTTCAGAGAATAGGGAAAAAATTATGAGGACTCTTTTGGCAAAAGAAAAGGTAGATGATCAAGTTGACTTTAAGGAGTTAGCAACTATGACAGAAGGATATACTGGAAGTGACTTGAAGAACCTTTGCACAACTGCTGCGTACCGGCCTGTTCGAGAGTTAATTCAACAAGAGAGACTGAAGACTCAGGTATTAATGCAATTTGTTTATAAGCAGAACGCTGCTGATAAAGGAGATCAATCAACAACAGAAAATGTCCAAGATGCTGAGAATGCGCAGGAGGGAGTTGGAAAGGAAAGAGTTATTGTGCTTAGGCCATTGAACATGCAGGACTTGAGAGAGGCAAAAAATCAGGTTGCGGCAAGCTTTGCAACCGAGGGAGCAGGAATGAATGAGTTGAAGCAATGGAATGAGTTGTATGGTGAAGGTGGTTCTAGGAAGAAACAGCAATTAACTTACTTCCTATGA 2550 0.4173 MEPKGLLISALSVGVGVGVGIGLASGQSVSKWGGANNSSSNALTVEKIEQEMLRLVVDGRETNVTFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSGNKESVFKRSTSETTLERLSGLFGSFSIFPQKEEPKGKIIRQNSGVDLRSMGNDTSCNPPKIRRNASATNISSLALQNAPNPGSLRRTASWSFDEKLLIQSLYKVLSYVSKTYPIVLYLRDVEHLLNRSQRAYKLLQKMLEKLSGPVLILGSRVLDPGNDYSEVDEKLASVFPYNIEIRPPDDESHLVSWKTQLEEDMKKIQVQDNKNHILEVLSANDLDCDDLDSICVADTMVLSNYIEEIVVSAISYHLMKNKDPEYRNGKLVISCNSLSQALGIFQEGKSHGRDTLKLEAQDVKSEKEREEVGAVKPEAKPDNKSPQKKTEGAATASVAKAENVTSAPPEPKVSEPPPDNEFEKRIRPEVIPANEINVTFDDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPEQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSSENREKIMRTLLAKEKVDDQVDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKTQVLMQFVYKQNAADKGDQSTTENVQDAENAQEGVGKERVIVLRPLNMQDLREAKNQVAASFATEGAGMNELKQWNELYGEGGSRKKQQLTYFL 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0645 849 Gene3D - 521 693 IPR027417 -
Mibi10g0645 849 Gene3D - 694 756 - -
Mibi10g0645 849 MobiDBLite consensus disorder prediction 437 512 - -
Mibi10g0645 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 751 IPR027417 -
Mibi10g0645 849 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
Mibi10g0645 849 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 46 848 - -
Mibi10g0645 849 MobiDBLite consensus disorder prediction 437 471 - -
Mibi10g0645 849 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 521 696 - -
Mibi10g0645 849 Pfam AAA+ lid domain 716 751 IPR041569 -
Mibi10g0645 849 CDD AAA 560 693 - -
Mibi10g0645 849 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Mibi10g0645 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 374 IPR027417 -
Mibi10g0645 849 SMART AAA_5 558 695 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0645 Mibi-ChrMibi10 15317200 15322967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0645 522 759 Calmodulin-binding Proteins AT3G56690 37.860 1.62e-42 166