Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0638 ATGAGAGGTAGGGCTTTATGTGTCTATTTCTTTTCTTGCAATACTATGAAGTACTCAATTTTCATAGAGAAGAACCCCTCTGAGAGCAAAAAATATCTCCACCACGCTCTTCGTTCACCGGTGTGTGAAGAAAAATCAAGGGAGATGGTATCATCATCAGCTGGTGGATTCTGTTACTCCGAGGTATCAACGGGGAATAACCCGGCTGCGGCGGCGATCCAAACACATCATCATCAGATCCAAGGGTTTGAATCCGACCAGGATATGTTCAATCTCACAACAAGCATGGACATGATTGGCTTCTCCAAGAATCTTCACCACCACCAACAACAACAACAAAGTAGTGAAAGTAACAACAGCCTTGTTTGGAAAAGCTTTCTGGGTAGTAAACCCACCACCCATCACCAAAATCCTGGTCCTTCTTCTACTACTTCCAAAACAACCACCACCATAGATAATAATAATAATAATAATAACGAGTCTGGTTCCACCAATTTCTATCATCACTACACTAAATCAGATTTCACTTCTCCCAACCATGATAATAATCTGATTGTAGGAGAAGCCCATCATCATCATCATCATGATTCTTCGTCTGCCACCTGGCAAGATAACAGGTTACTTGTGGATGATTCTTCTTTTAGGTGTGTGTTCCCTTGTGAAGGGAACGAAAGGCCAAGCCAAGGCCTTTCGCTTTCTCTGAGTTCAAATAATCCCTTAAGTATTGGGTTACAATCTTTTGAACTAAGACACACCAACCACCACCCAGATTTTGTTCCTTCACCTAGTACAGTAGGTGGAGACAAGATATTGTTGGGGAAGTCAATGAATCCTCATCAAGAGCAAGAAGAAGCAGCTGGGAATCTGTATCAAGGCCACTTTCTGCTTAAGAACTCTAAATATTTGCTCCCTGCACAGGAACTTCTCAATGAATTTTGCAGCCTGGGAACCAAGCAAAGTGACTTAGTGAAGCAAAAATCATCAAATCAGAAGCACAAACAGTGGGAAGATGATAACGGAATCGGTCCCTTTAAGAAACACCCCGTTGGATCTCTAGAATTTATCGAATTACAGAAGAGAAAGACCAAACTCCTCACCATGCTTGAAGAGGTTGAGAGGAGATACAGGCACTACTGCAATCAAATGAAGGCGGTGGTGTCGTCGTTTGAGGCGGTGGCTGGGGCGGGGGCGGCGAGGGTTTACTCAGCTTTGGCGTTGAAGGCGATGTCAAGGCATTTCAGGTGTTTGAAAGATGGGATATTGAGTCAAATAGAAGTGGCAAGAAGAGGGATGGGAGAGAAAGATCCAGTAGCACCTGGGACTACAAGAGGTGAAACACCAAGACTCAGAATCATTGACCAAACTCTTAGACAACAAAGAGCTTTCCAACAAATGAGCATGATGGAAAGTCATCCATGGCGTCCCCAAAGAGGCCTACCTGAACGATCTGTTTCAGTTCTTCGAGCTTGGCTCTTCGAACATTTTCTTCATCCGTACCCAAGTGATATGGATAAACATATATTGGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAACTGGTTTATTAATGCAAGAGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAAATGAAGGAACATGAAAACAACATGGCTTCTTCTGAGGGGATCACCGATCCGGCCATCGACGACGACAACAGCATCTTGGCCGGCACCGGCCGGAGCCTTGATAATCCGGCACCGCCACCTCCTCCGGCCACCCGCCTTGCAGACCAAAAGCCGCTCCAAAACCACCGGTTGCTTAGAATAGACTCTGAGTGTGTGTCTTCTATCATAAACAATCAGGTGGACCACAAAGTCGAATCCACAAAGAACAATCATAATAATAATAATCCCCATCAAGATGGTACATTTGGATCCGTGGAGCTTGATTTTTCATCTTACAACACTCACAACTCAGCTGGAATGGTTTCTGCTTATAGTAATGAGAATGGGAACAATAGTAATCATCATCATCAGGGCTATAACAATGGAGGTGTTTCATTGACTCTAGGGTTACAGCAACATGGCGGAAGTGGTGGGGTGAGTTTGGCTTTCCCACCGCCATCTCAGGCGTCACTGTTCTATCCAAGAGATCAAATGGAAGATTGCCAACCTGTTCAGTACTCACTTTTGGATGGTGAGGCACAAAATCTTCCTTACAGAAATTTAATGGGCGCACAGTTGCTCCATGATTTGGCAGGATAG 2244 0.4456 MRGRALCVYFFSCNTMKYSIFIEKNPSESKKYLHHALRSPVCEEKSREMVSSSAGGFCYSEVSTGNNPAAAAIQTHHHQIQGFESDQDMFNLTTSMDMIGFSKNLHHHQQQQQSSESNNSLVWKSFLGSKPTTHHQNPGPSSTTSKTTTTIDNNNNNNNESGSTNFYHHYTKSDFTSPNHDNNLIVGEAHHHHHHDSSSATWQDNRLLVDDSSFRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRHTNHHPDFVPSPSTVGGDKILLGKSMNPHQEQEEAAGNLYQGHFLLKNSKYLLPAQELLNEFCSLGTKQSDLVKQKSSNQKHKQWEDDNGIGPFKKHPVGSLEFIELQKRKTKLLTMLEEVERRYRHYCNQMKAVVSSFEAVAGAGAARVYSALALKAMSRHFRCLKDGILSQIEVARRGMGEKDPVAPGTTRGETPRLRIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEMKEHENNMASSEGITDPAIDDDNSILAGTGRSLDNPAPPPPPATRLADQKPLQNHRLLRIDSECVSSIINNQVDHKVESTKNNHNNNNPHQDGTFGSVELDFSSYNTHNSAGMVSAYSNENGNNSNHHHQGYNNGGVSLTLGLQQHGGSGGVSLAFPPPSQASLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0638 747 SMART HOX_1 473 537 IPR001356 GO:0003677
Mibi10g0638 747 MobiDBLite consensus disorder prediction 128 173 - -
Mibi10g0638 747 SUPERFAMILY Homeodomain-like 474 540 IPR009057 -
Mibi10g0638 747 FunFam BEL1-like homeodomain protein 4 476 538 - -
Mibi10g0638 747 Gene3D - 476 538 - -
Mibi10g0638 747 CDD homeodomain 473 534 IPR001356 GO:0003677
Mibi10g0638 747 SMART prehox3 290 422 IPR006563 -
Mibi10g0638 747 Coils Coil 354 374 - -
Mibi10g0638 747 Pfam Associated with HOX 296 420 IPR006563 -
Mibi10g0638 747 MobiDBLite consensus disorder prediction 620 643 - -
Mibi10g0638 747 ProSiteProfiles 'Homeobox' domain profile. 470 533 IPR001356 GO:0003677
Mibi10g0638 747 MobiDBLite consensus disorder prediction 655 689 - -
Mibi10g0638 747 MobiDBLite consensus disorder prediction 549 593 - -
Mibi10g0638 747 Pfam Homeobox KN domain 490 529 IPR008422 GO:0003677|GO:0006355
Mibi10g0638 747 MobiDBLite consensus disorder prediction 655 696 - -
Mibi10g0638 747 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 147 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0638 Mibi-ChrMibi10 14762884 14767690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0638 205 746 Homeobox Transcription Factor Family AT5G41410 45.777 3.12e-136 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi10g0638 POX 3.6e-46 No_clan