Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0636 ATGGGATTTCCTATAGGTTGCACCGAGCTCGTCTTCCCAAAATTCCTCCTCCAAATCCTCGCCATACTTGGAGTCCTCAAAGGAATCACATCATTCTTCCTTCATTCCTTCGGCCTCCCCGATTTTCTCGAACCTGAAATTCATCACTTTTTAGATTCCGACGATAACACATATTACCACAATGACCAATTCGAGTCTGCTAGCTCGGTTTTGATACAAGAGATGCTGCCTGTGGTGAAGTTCTCTGAGCTAAAACATGTGGTGGAGCCACAAAGTAGCTGCACCGTGTGCTTGTATGGATTCGACGGCTGCGATGAGATCCGACGGCTCACAAACTGCCGCCACGTGTTCCATAAGGAATGTTTGGACCGTTGGTTGGGATATGATCGGAAGACTTGTCCATTGTGTCGATCACCGTTTATTCCTTACCATTTGATGGAATCTTTTAATGAGTCTTTGTGGGCTGCTTCTGGTATACCTGAATTCTACCCAGAATCTGATTCAGAACTAGTATTATGA 519 0.4528 MGFPIGCTELVFPKFLLQILAILGVLKGITSFFLHSFGLPDFLEPEIHHFLDSDDNTYYHNDQFESASSVLIQEMLPVVKFSELKHVVEPQSSCTVCLYGFDGCDEIRRLTNCRHVFHKECLDRWLGYDRKTCPLCRSPFIPYHLMESFNESLWAASGIPEFYPESDSELVL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0636 172 CDD RING-H2 94 137 - -
Mibi10g0636 172 ProSiteProfiles Zinc finger RING-type profile. 94 137 IPR001841 -
Mibi10g0636 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 66 156 - -
Mibi10g0636 172 SMART ring_2 94 136 IPR001841 -
Mibi10g0636 172 SUPERFAMILY RING/U-box 78 143 - -
Mibi10g0636 172 Pfam Ring finger domain 93 137 IPR001841 -
Mibi10g0636 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 142 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0636 Mibi-ChrMibi10 14680199 14680717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0636 1 158 C3H Transcription Factor Family AT1G63840 47.826 7.93e-47 149