Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0626 ATGGTGCCAGAGAACATGAAGAAACAACTTGCCTTGGCTGTGAGGAGCATCCAATGGAGCTATGCGATATTCTGGTCTGCTTCTAGTAGCCAACCCAGGGTTTTGAAATGGGTTGAGGGATATTACAATGGCGATATTAAGACTAAGAAAACAAGTCAGGCAGTACAACGTAGTTCTGACCAAATAGGTTTGCAGAGGAGTGAGATGTTGAGAGAGCTATTTAAGTCCCTTTCAACTGCAGAATCCACCCCACAACTTAAAAGGCCCTCAAATTCGTTAAGCCCTGAAGACCTCACAAATGCTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTCAATATTGGGCAGGGATTACCTGGAAGAACTCTGGCAAATGGACAGCCTATTTGGGTTTACAATGCCCCACGTGCTGATACTACGCTTTTTAACCGCACTCTGCTCTCAAAGACAGTGGTATGCTTCCCTTTTCTGGAAGGTGTTGTTGAGCTTGGGACAAGTGATCTGATTTCAGAAGACCTCAGCCTCATTCAACGTATCAAAACTTCTTTCCTGGATATTCTGAATGCCAATGCTCCTGGATCTACATTTGAAACTGGAAACAATAAAGATATTGCTTCTGTAGCATTTGTCCACAGTGCTTATGATGCCAAATTATCGGAAGTGGGATCTGCTGTAAATAATAAAACTTTTGCCGATAGTTCAAATGCCTTTGAAGTAAACTGCTTGGCACATGAGACATATATGGTTGAAAAAATAAATGGTGGTGCTTCTCAGGTCCAAAGCTGGCAAGTTATGGATGATGAATTGAGTAATGATGCCCATAACTCGATGACTTCTAGTGACGGAAGTTCTCAAATTCTTGCTGATCCTGAAAAGACTGCCTCTGTTCCTAAGGATCGAAACCCAACTGACCATTCTGCGCAAGACCTCCAAGAGTGCAATAAAACAAGAATGACCTTAAAGAATTGTCAAAATGATGACTGGCATTATCGAAAAGTTCTTTCTGCAGTTCTAAAAGATTCAGACCAGTTAGCTATTAGAGCACAATTTCAAAGTAAGGAATCCAGCTTTGCTAGTTGTGAGAAAAGAGGATCAATGAGTTGTGAAACGCTAAGAGGAGGAGCCCCACAGAAGTTGTTGAAGAAGGTATTGTTTGAAGTTCCTCGGATGCATATGGATGGGCTTCTTGAGTTCCAAGAAGAAAATGATGACAAAGAGAGAATGAGACCGGAGGTTGATGAAATTGGCATGAACCATGTATTGTCAGAAAGAAGGAGAAGAGCAAAACTAAACGAAAGGCTTTTAACCCTTAGATCAATGGTCCCTTCAGTTAGTAAGGATGACAAAGTTTCAATACTAGATGATGCAATCGAATACCTTAGAAAGCTTGAGAAGAAGGTTAGAGAACTGGAAGCATGTAGGGAGCTAATAGATTTAGAAACCAAAGCTAAAAGAACACCTCAAGATTTGGTAGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCATGAAGTCAATGAATAGCAAGAGAAAGGCATGTGACATTGAAGAACAGACATGGCTAGAGAATGATTTATTTGCTCTAAGTGATAGCTCTACTAGTAGTGTCACTATCAGTTTGAGCAACACCGATGTACTGATTGAAGTGAAATGTCCATGGAGAGGAGGCGTAGTGATGAAAATTATGGAGGAACTTAGGAGTTTCAACTTGGATTTACGATCAATTCAGTCATCAGAAGCTGATGGGATTCTTCTTCTAACCATTAGATCTCAGGTAAGCGAATGA 1797 0.4051 MVPENMKKQLALAVRSIQWSYAIFWSASSSQPRVLKWVEGYYNGDIKTKKTSQAVQRSSDQIGLQRSEMLRELFKSLSTAESTPQLKRPSNSLSPEDLTNAEWYYLVCMSFVFNIGQGLPGRTLANGQPIWVYNAPRADTTLFNRTLLSKTVVCFPFLEGVVELGTSDLISEDLSLIQRIKTSFLDILNANAPGSTFETGNNKDIASVAFVHSAYDAKLSEVGSAVNNKTFADSSNAFEVNCLAHETYMVEKINGGASQVQSWQVMDDELSNDAHNSMTSSDGSSQILADPEKTASVPKDRNPTDHSAQDLQECNKTRMTLKNCQNDDWHYRKVLSAVLKDSDQLAIRAQFQSKESSFASCEKRGSMSCETLRGGAPQKLLKKVLFEVPRMHMDGLLEFQEENDDKERMRPEVDEIGMNHVLSERRRRAKLNERLLTLRSMVPSVSKDDKVSILDDAIEYLRKLEKKVRELEACRELIDLETKAKRTPQDLVERTSDNYFNKTDNGMKSMNSKRKACDIEEQTWLENDLFALSDSSTSSVTISLSNTDVLIEVKCPWRGGVVMKIMEELRSFNLDLRSIQSSEADGILLLTIRSQVSE 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0626 598 PANTHER TRANSCRIPTION FACTOR TT8 2 596 - -
Mibi10g0626 598 Pfam Helix-loop-helix DNA-binding domain 419 465 IPR011598 GO:0046983
Mibi10g0626 598 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 415 464 IPR011598 GO:0046983
Mibi10g0626 598 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 418 478 IPR036638 GO:0046983
Mibi10g0626 598 SMART finulus 421 470 IPR011598 GO:0046983
Mibi10g0626 598 MobiDBLite consensus disorder prediction 272 309 - -
Mibi10g0626 598 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 184 IPR025610 -
Mibi10g0626 598 MobiDBLite consensus disorder prediction 272 291 - -
Mibi10g0626 598 Gene3D - 412 481 IPR036638 GO:0046983
Mibi10g0626 598 Coils Coil 454 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0626 Mibi-ChrMibi10 14426334 14429563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0626 2 592 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 44.249 1.38e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g0626 bHLH-MYC_N 7.4e-44 CL0161