Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0617 ATGGGCAAAGGTAGACCTAGGGCTGTAGAAAAAGGTGTAGCAGGACAGAGTCTTAGTGTTTCATCGTCCGGGTTATTGAATATACCGTTAGGGCCTGTATATTTTCCTTCCGAAGATGAATTTAGAGATCCCTTGGAATATATTTATAAGATTAGACCTGAAGCTGAGCCATATGGAATTTGTAAGATTGTGCCTCCAAAAAGTTGGAAGCCCCCATTTGCTTTGGATCTAGATTTTTTTACTTTCCCTACTAAAACGCAGGAAATTCATAAGTTACAGGCTCGTCCTGCTGCGTGTGACTCCAAGACTTTCGAGTTGGAGTACTCTAGGTTTTTAGAGGATCACTGTGGTAAAAAGTCTAGGAAGAAAATTGTTTTTGAAGGGGAAGAACTGGACTTGTGCATACTGTTTAATGCTGTTAAGAGATTTGGCGGTTATGATAAGGTTGTGAAGGAAAAGAAATGGGGGGATGTTTCCCGGCTTGTAAGGCCAGGAAGAAAAATTACAGACTGTGCAAAGCATGTACTATCACAATTGTTTTGTGAACATCTGTATGATTATGAGGATTTCTACAATAAGGTGAATCAAGAGACGGGTAAGAAAGGCATGCTTGAGGATGGAAAAAGTGATCATGGCGCTCGATCTTCAGGGTCTAAGAGGATGAGAAAAAGTTTTGATTGTTTGAAATTTAAGGATTGTAAAGTGCAGGGGGAAGAACATGACCAGATTTGTGAGCAATGCAGAAGTGGTTTGCACGGGGATGTGATGCTTTTATGTGATAGGTGTGATAAGGGCTGGCATATATATTGCCTCTCTCCACCCTTGAAGCAAATCCCTCTAGGAAATTGGTATTGCTCTAATTGCTTGAATTCTGACATGGACAGCTTTGGTTTTGTGCCCGGTAAGCAGTACACCTTGGAAGCCTTTAGACGTGTGGCTGATCGGTCAAGGAGGAGGTGGTTTGGACCAGGACCTGTTTCAAGGGTGCAAATAGAGAAGAAATTTTGGGAGATTGTAGAGGGATCGGTTGGTGAGGTTGAGGTTATGTACGGAAGTGATCTAGATACGTCTGTCTTTGGAAGTGGTTTTCCACGCTCAACTGATCAGAAACCAGAATCAATTGATTCAAAATCATGGGATGAATACTCATCTAACCCATGGAATCTTAACAATTTGCCTAAATTGAAAGGGTCAATGCTTCAAGCTGTTCATCAAAATATCACGGGGGTGATGGTACCCTGGCTGTATATTGGGATGCTATTCTCATCCTTTTGCTGGCATTTTGAGGATCATTGTCTTTACTCAATAAATTATCTACACTGGGGAGAGCCAAAATGCTGGTACAGTGTTCCTGGTAGTGAAGCTAGTGCTTTTGAGAAGGTGATGAGAAGCAGTCTTCCTGATCTTTTTGACGCGCAACCAGATCTGCTTTTCCAGCTTGTAACTATGTTAAACCCATCTGTTTTGCAAGAACACGGAGTTCCAGTCTACAGCGTAGTTCAGGAGCCTGGGAATTTTGTTATTACATTTCCCAGATCTTACCATGGAGGATTCAATCTTGGTTTAAATTGTGCAGAGGCAGTTAATTTTGCCCCTGCTGATTGGCTGCCTTATGGTGCATTTGGAGCTGATCTCTATAAGCGGTATCACAAAGCTGCTGTCTTGTCTCATGAGGAGCTTCTTTGCGTAGTAGCCCAGTACGGTGACAAAGACACCAAAGCATCACCTTATTTGAAGAAGGAATTACTAGGAATATATGATAAAGAGAAATCTTGGAGAGAAAAACTCTGGAAAAATGGCATTGTCAAATCATCTCGCATGGCTCCTCGGCAATGTCCTCAGTATGTGGGAACTGAAGAGGATCCATCATGCATTATTTGCCAGCAGTATCTATATCTTTCTGCTATTGTGTGCAGTTGCAGGCCATCTTCTCTTGTATGCCTGGAGCATTGGGAACATCTTTGTGAGTGTAAAACTGTAAAACTACGTCTTCTCTATCGGCACTCACTTGCAGAATTGTATGACTTGGCACTTTCTATTGATAATAATACTTCTGAGGAGAAAGCACTGGTTAGGAATATTGGAAAGAGTTCTTCATGTCCTGGTACTTTGACAAAAAAGGCAAAAGGTGGTTCCTTTACTTTCTCACAGCTTGCTGCACAATGGCTTCTGAGATCTGGTGAGATTCTTCAGAATCCATATTCAAGTGATGCTTTTGTTTCTGCTCTAAGGGAAGCTGAACAGTTTCTTTGGGCTGGTCCTGAGATGAATTCTGTTCGAGATCTGATGACGAACTTGATTGAAGCTCAGAAGTGGGCAGAAGGGATAAGAGACTGTTTAAGAAAACTTGAAGCGTGGTTGTCTGACCAGGACTCTGATATGGAGAAAGTGCACTTAGAATTTATTGATGAGCTACTAACATTTGATTCTACACCATGCAATGAGCCTGCTTATTATAAATTGAAGGAATATAAAGAAGGGGCCGTCTTGTTAAGTCAGGAGATTAATATTGCTTTGTCAAAGTGTTCAAAGATGTCTGAGTTGGAATCTCTACATTCAAGAGCTTGTGGCTCTCCAATCTACATGAACAATGTTAAGAATTTGGAAAGGAAAATTTCTTCTACTAAGGCATGGCTGCGTAGAGCTAGAAGCTGCATCTCAATAAAACATCCTGCTGCTGTAGAGCTTGATGTTCTTTTCAAGTTGAAGTCAGAGATTATGGAGCTTCAAGTGCAACTTCCAGAGATAGAAGTGATTCAGAATATATTAATTCAAGCGGAATCTTGTAGTTTAAAATGTAGTGAGATATTACAAGGTCCCATGAATTTAAAGAATGTCGAGTTTCTGCTTGAGGAATGGGACAGCTTTATCGTTGATGTACCAGAGGTGAAGCTCCTGAGGCAATATTATAAGGATGCTGTTTCATGGGTTTCCAACTTTAACCGTGTATTAGTGACAACAAATGAACGGGAGGATCAACATAATGTTGTTGATGAACTGAAGGGTATTTTAGAAGATGGTTTATCTTTAAAAATCCAAGTTGAAGCATTGCCATTAGTTAAGACTGAGTTGCAGAAGGCTCTTTGCCGGGAAAAGGCTCATAAGGCGCATAAATCTAAGATGTCTCTGGAATTTGTTCAAGAAGTGATGAAGGAGGCCAGACTGCTAAAAATTGAGGGAGAGAAATTATTTGTTGGCTTATCTGGTGTACTTGCTGTTGCCATACCTTGGGAGAAAAGGGCTAAAGAGATTCTTTCACATAAGGCTTCCTTCTCTGACTTTGAGGACATGATCAGGACTTCAGAAACTATATTTATAATTCTTCCTTCCCTTGATGATGTGAAGGAAGCACTATTGGAAGCTAAGTCATGGTTAATAAATTCAAAACAATTCTTGGTTTCTTCTACTTGTCCATCAGATTCTCTACAGAAAGTTGAGAACCTTCAGATGTTGGTTTCTCAGTCGAAGCTTCTTAAAATATCTTTTGAAGAAATAAGGATGCTTGAAATAGTTCTGCAAAACTGCAAAGATTGGGAGGCTGAGGCATGTTCTGTATTGGAAGATGCCCAGCATATTTTTGAATTGGATGACATTGTTTATGGAATGAGCAGCGGCCTAACATCCAAAGTTGAAGATTTGGTTGCCAGAATGCAGTCTACCACAAGATCCGGTTTATTGCTTGGTTTTGAGTTTGAAGAGATTCCAAAACTTGAAGCAACTTGTTCTACACTGCGGTGGTGCAAAAACATTCTTTCCTTCTGCAATCTTTCTCCGTCTTTAGAGGATGTTTTGGAGGCTACAGAAGGTCTTCCTTATTCGTGTGGTTCTTGGGTCCTATTGAATCTATTGATTGGTGGAGTCAAATGGCTTAGGAGAGCCTTGGAGGTAATTTCTGGACCACACAATTCTAAAAGCAAGTCAAGTGAAGTTGAAGATATTATTAGAGATTACCAGACTATTAATATTCCTTTTGCAGCAGTAATCGTCCAGCTTGAAGAAGCTATTGGAAAACATAGGTTGTGGCAAGAACAGGCGCATCAATTCCTTACCCTTTGTTCTGGGGAAAAGTCTTGGTTATCAATGTTGAAACTGAAGGAACTAGGTGATAGTGATGCTTTCAGCTGCACAGAACTGGATTTGATTTTATCTGAAGTTGAGAAGGTTGAGAATTGGAATAAACGCTGCATGAATTATGTAGGAAATTTAGTGCAAAATCAGTATTCACTTCTTGATGCTCTGCAGAAGATGAAACAGAGACTTGATAGGTCATTGTCCATATATGGGAAGTTGAAAGACTGCAAGGAAGACTGTTTATGCATCTGCTGCTTTGCTGACTCTGAAGATCAGGAATTTCTTACTTGCTCCTCTTGTAGAAATTGCTACCATATACTGTGTATTGGACCATTGGTGGACAATATCCATGAAAATTATATATGCCCTTCCTGTAAAATGTTGAAGGGTGAATCCAATTATAAGAAGGGAACTCTCCCCAAGCAGTTTGGGGAGAAGCGTGCTGAACTGAAGGTTCTTCTTCAACTCCTCTCTGATGCTAAAATTTTTTGTGTAAGGATTGATGAGACAGATGCCCTCAACCAACTTGTTGAGCAAGCACTTCTATGCAGATCTTGCTTGAGAGAAATATTGAACTTCACATCAGCTAATGTAGACAATGATCTTAGCATCATCTCTGAAAGATTGACCATAGCTATTAAGGCCTGTGAGGTTGCAAGTGTCTGTGATCATCAAGATGTACATGACCTTGAGTCAGCATTAGCAAGACACCTTTGGAAAATTCAAGTCAATGGAATGCTAAATAGTTCTCTAAAACCTTCCATTCAAGAGGTTCAGAAGCAGCTGAAAGAGGGATTGGTCATTGAAATATCACCTGAAGATCATTATATGCTGCCGCTTGCAAAAATGAATTGCTTATATTTACAGTGGGCAGAACAAACCAAGAAGGTTGCAGCTTATTCTGGGGCTCTTGGCCTAGATAAAGTTTTTGAACTCATTGCAGAAGGTGAAAACTTGCCTGTTAATGTGGATGAGGATATCAGGATTTTAAGGGCTCGAAGTATGCTTTATTGCATTTGTCGAAAGCCCTTTGATCCCGGGAGGATGATTGCATGTAATCAATGCGGTGAGTGGTATCACTTTGATTGCATGAAACTACCATACAGTCAAGAGTTCTACATCTGTCCTGCATGTAACCCCTCTTTGGCAGGAATGCTAACGTCTCTGGATCATGAGAGATTAAGTAGCAGTAAACTGGAGGAACCTAAAACACCATCTCCAAGGCATACGAATCCAAGAAAGAAACAGAAGATAGATGAGGCAATATATGTAAGTGAGGATCAAATTCAAATTAACAAGTTTAGGAATGTGACTGTGATAGAATGTGTTAGGTGGCAAAATCGAAAGCCTTTCAGAAGAGCAGCTAAGAAACGTGTTGACCTTCGGAGTCTTTCTTCATTTCTATGTAGACAACAACACTAA 5493 0.4034 MGKGRPRAVEKGVAGQSLSVSSSGLLNIPLGPVYFPSEDEFRDPLEYIYKIRPEAEPYGICKIVPPKSWKPPFALDLDFFTFPTKTQEIHKLQARPAACDSKTFELEYSRFLEDHCGKKSRKKIVFEGEELDLCILFNAVKRFGGYDKVVKEKKWGDVSRLVRPGRKITDCAKHVLSQLFCEHLYDYEDFYNKVNQETGKKGMLEDGKSDHGARSSGSKRMRKSFDCLKFKDCKVQGEEHDQICEQCRSGLHGDVMLLCDRCDKGWHIYCLSPPLKQIPLGNWYCSNCLNSDMDSFGFVPGKQYTLEAFRRVADRSRRRWFGPGPVSRVQIEKKFWEIVEGSVGEVEVMYGSDLDTSVFGSGFPRSTDQKPESIDSKSWDEYSSNPWNLNNLPKLKGSMLQAVHQNITGVMVPWLYIGMLFSSFCWHFEDHCLYSINYLHWGEPKCWYSVPGSEASAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQEHGVPVYSVVQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPYGAFGADLYKRYHKAAVLSHEELLCVVAQYGDKDTKASPYLKKELLGIYDKEKSWREKLWKNGIVKSSRMAPRQCPQYVGTEEDPSCIICQQYLYLSAIVCSCRPSSLVCLEHWEHLCECKTVKLRLLYRHSLAELYDLALSIDNNTSEEKALVRNIGKSSSCPGTLTKKAKGGSFTFSQLAAQWLLRSGEILQNPYSSDAFVSALREAEQFLWAGPEMNSVRDLMTNLIEAQKWAEGIRDCLRKLEAWLSDQDSDMEKVHLEFIDELLTFDSTPCNEPAYYKLKEYKEGAVLLSQEINIALSKCSKMSELESLHSRACGSPIYMNNVKNLERKISSTKAWLRRARSCISIKHPAAVELDVLFKLKSEIMELQVQLPEIEVIQNILIQAESCSLKCSEILQGPMNLKNVEFLLEEWDSFIVDVPEVKLLRQYYKDAVSWVSNFNRVLVTTNEREDQHNVVDELKGILEDGLSLKIQVEALPLVKTELQKALCREKAHKAHKSKMSLEFVQEVMKEARLLKIEGEKLFVGLSGVLAVAIPWEKRAKEILSHKASFSDFEDMIRTSETIFIILPSLDDVKEALLEAKSWLINSKQFLVSSTCPSDSLQKVENLQMLVSQSKLLKISFEEIRMLEIVLQNCKDWEAEACSVLEDAQHIFELDDIVYGMSSGLTSKVEDLVARMQSTTRSGLLLGFEFEEIPKLEATCSTLRWCKNILSFCNLSPSLEDVLEATEGLPYSCGSWVLLNLLIGGVKWLRRALEVISGPHNSKSKSSEVEDIIRDYQTINIPFAAVIVQLEEAIGKHRLWQEQAHQFLTLCSGEKSWLSMLKLKELGDSDAFSCTELDLILSEVEKVENWNKRCMNYVGNLVQNQYSLLDALQKMKQRLDRSLSIYGKLKDCKEDCLCICCFADSEDQEFLTCSSCRNCYHILCIGPLVDNIHENYICPSCKMLKGESNYKKGTLPKQFGEKRAELKVLLQLLSDAKIFCVRIDETDALNQLVEQALLCRSCLREILNFTSANVDNDLSIISERLTIAIKACEVASVCDHQDVHDLESALARHLWKIQVNGMLNSSLKPSIQEVQKQLKEGLVIEISPEDHYMLPLAKMNCLYLQWAEQTKKVAAYSGALGLDKVFELIAEGENLPVNVDEDIRILRARSMLYCICRKPFDPGRMIACNQCGEWYHFDCMKLPYSQEFYICPACNPSLAGMLTSLDHERLSSSKLEEPKTPSPRHTNPRKKQKIDEAIYVSEDQIQINKFRNVTVIECVRWQNRKPFRRAAKKRVDLRSLSSFLCRQQH 1830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0617 1830 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Mibi10g0617 1830 Pfam PLU-1-like protein 893 1125 IPR013637 -
Mibi10g0617 1830 Pfam PLU-1-like protein 1142 1394 IPR013637 -
Mibi10g0617 1830 CDD PHD_RSF1 244 288 - -
Mibi10g0617 1830 ProSitePatterns Zinc finger PHD-type signature. 1695 1735 IPR019786 -
Mibi10g0617 1830 Gene3D Cupin 273 553 - -
Mibi10g0617 1830 FunFam Predicted protein 349 552 - -
Mibi10g0617 1830 Pfam PHD-finger 243 290 IPR019787 -
Mibi10g0617 1830 Pfam PHD-finger 1694 1737 IPR019787 -
Mibi10g0617 1830 SUPERFAMILY Clavaminate synthase-like 319 564 - -
Mibi10g0617 1830 ProSiteProfiles Zinc finger PHD-type profile. 241 291 IPR019787 -
Mibi10g0617 1830 SMART JmjN_1 30 71 IPR003349 -
Mibi10g0617 1830 ProSiteProfiles ARID domain profile. 98 192 IPR001606 GO:0003677
Mibi10g0617 1830 SMART PHD_3 1694 1736 IPR001965 -
Mibi10g0617 1830 SMART PHD_3 1438 1483 IPR001965 -
Mibi10g0617 1830 SMART PHD_3 243 289 IPR001965 -
Mibi10g0617 1830 Pfam C5HC2 zinc finger 624 675 IPR004198 -
Mibi10g0617 1830 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1375 1489 IPR013083 -
Mibi10g0617 1830 SMART cupin_9 381 547 IPR003347 -
Mibi10g0617 1830 ProSiteProfiles JmjC domain profile. 381 547 IPR003347 -
Mibi10g0617 1830 MobiDBLite consensus disorder prediction 1753 1773 - -
Mibi10g0617 1830 Gene3D Cupin 13 126 - -
Mibi10g0617 1830 SMART bright_3 99 193 IPR001606 GO:0003677
Mibi10g0617 1830 Pfam JmjC domain, hydroxylase 414 530 IPR003347 -
Mibi10g0617 1830 Gene3D Cupin 1689 1823 - -
Mibi10g0617 1830 ProSitePatterns Zinc finger PHD-type signature. 244 288 IPR019786 -
Mibi10g0617 1830 SUPERFAMILY ARID-like 81 196 IPR036431 GO:0003677
Mibi10g0617 1830 SUPERFAMILY FYVE/PHD zinc finger 238 291 IPR011011 -
Mibi10g0617 1830 CDD ARID 100 188 - -
Mibi10g0617 1830 Pfam ARID/BRIGHT DNA binding domain 112 188 IPR001606 GO:0003677
Mibi10g0617 1830 PANTHER LYSINE-SPECIFIC DEMETHYLASE 27 1150 - -
Mibi10g0617 1830 SUPERFAMILY FYVE/PHD zinc finger 1429 1484 IPR011011 -
Mibi10g0617 1830 SMART ARID_2 95 188 - -
Mibi10g0617 1830 SUPERFAMILY FYVE/PHD zinc finger 1691 1739 IPR011011 -
Mibi10g0617 1830 Pfam jmjN domain 32 65 IPR003349 -
Mibi10g0617 1830 FunFam Transcription factor jumonji (JmjC) domain-containing protein 17 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0617 Mibi-ChrMibi10 14098429 14120940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0617 31 95 JUMONJI Transcription Factor Family AT1G08620 56.522 4.50e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mibi10g0617 PLU-1 8e-09 No_clan