Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0616 ATGGATGGGAGAGAGGCTATGGCATTCTCTGGTGGCTCAGCTCCGTATTACATTCATAGAGGAAATGTTTCTGGGTCTGGCTCTGGAACACAAGCTCAGGGGTTCCAACAATCACCTCCTGGTTTTAGACCTTTGACAAACGTTAGCTTTCAGGTTCAGTCTAATGTCCGAGGTGGTTCTGTGGGTTCCACATTTTCAGTAGAGCCTCCTCGTAGTAATTTTAGTCAAGGCATTAACATAAGTTCCTCTCCTGGAGTACCTTCTTCAGGTGAACCCTTGAAGAAGAAGAGAGGAAGGCCTCGTAAATATGGTCCTGATGGGCCTGTTTCTTTGAGGCTGTCTACCTTGTCTGGAAGTGCTAATTCTACCCCAGGTTCAGGCACATCCTCTGAGAAACGGAATAGGGGACGTCCACCTGGTTCTGGCAGGAAACAGCAGCTAGCGGCTCTAGGTGAATGGATGAACAGTTCAGCCGGACTTGCTTTTGCACCTCATGTTATCACCATTGGAGCTGGGGAGGACATTGTGGCAAAGTTATTGTCTTTATCTCAGCAGAGACCAAGGGCTCTATGTATCATGTCAGGCACTGGCACAGTTTCTTCAGTCACTCTACGCCAACCTGCTTCAACAAACATCAGTCTCACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCTGGCTCATACTTGGTTGCTGAAGATGGGGGACCTCGGGATAGAACTGGGGGTTTAAGTGTTTCTCTTTCTAGCCCTGATGGTCAAGTTATTGGTGGTGGTGTTGCTGTGCTTATGGCCGCAAGTCCAGTTCAGGTGGTGGTGTGCAGTTTTGTATATGGAAGCGCTAAGATGAAGACAAAGCAAGTAACCTCTCCCAAGGCTGAGAAGAATTCTGAGCCTAAGACTCAGACTCAAACTCAGTCTCAGCGTGATGGTAACAAGATAAATAGCCCTATTACTCCAGCAAGTGCTCAAAACTACACTTTATCTGCATCAGCCATGTGGCCAGGGGACCTGAAAAGCTCACACACACATACTCATACTGGTATTGACTTGACCCGAGGCTGA 1065 0.4751 MDGREAMAFSGGSAPYYIHRGNVSGSGSGTQAQGFQQSPPGFRPLTNVSFQVQSNVRGGSVGSTFSVEPPRSNFSQGINISSSPGVPSSGEPLKKKRGRPRKYGPDGPVSLRLSTLSGSANSTPGSGTSSEKRNRGRPPGSGRKQQLAALGEWMNSSAGLAFAPHVITIGAGEDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASTNISLTYEGRFQILCLSGSYLVAEDGGPRDRTGGLSVSLSSPDGQVIGGGVAVLMAASPVQVVVCSFVYGSAKMKTKQVTSPKAEKNSEPKTQTQTQSQRDGNKINSPITPASAQNYTLSASAMWPGDLKSSHTHTHTGIDLTRG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0616 354 MobiDBLite consensus disorder prediction 112 135 - -
Mibi10g0616 354 Gene3D - 164 296 - -
Mibi10g0616 354 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 282 - -
Mibi10g0616 354 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 59 323 IPR039605 GO:0003680
Mibi10g0616 354 MobiDBLite consensus disorder prediction 23 88 - -
Mibi10g0616 354 MobiDBLite consensus disorder prediction 334 354 - -
Mibi10g0616 354 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
Mibi10g0616 354 MobiDBLite consensus disorder prediction 1 146 - -
Mibi10g0616 354 MobiDBLite consensus disorder prediction 294 322 - -
Mibi10g0616 354 CDD DUF296 164 276 IPR005175 -
Mibi10g0616 354 ProSiteProfiles PPC domain profile profile. 156 298 IPR005175 -
Mibi10g0616 354 MobiDBLite consensus disorder prediction 285 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0616 Mibi-ChrMibi10 14090792 14094268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0616 1 354 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 50.259 3.39e-97 291