Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0586 ATGGATTCGTCGAGGTCAATGGAGCGTTCCTCTGACGACATCGTCGATTCAACGCCTTTTTTAGGGAACTCAGGCAGTTCTTCGGATGAATTGCATCCCGGCCGTCGATTCGTGCGGAGACAGGGCCTCCGCCAAGCTGCACGGTTCCTCAGGCAGGCTAGTAGCCGCAGGATGATGATGCGGGAGCCATCAATGATGGTTAGGGAGGCTGCTGCCGAGCAATTGGAAGAGAGACAAAGCGATTGGGCTTATTCCAAACCCGTTGTGATTCTTGATATCATTTGGAATTTCGCCTTTGTTATCGTCGCTGCTACTGTATTGGTCATGAGCAGAAATGAATCGCCACGCGTGCCTTTGAGATTGTGGATTGTGGGTTATGCTATCCAATGCCTCCTTCACATATTCTGTGTCTGCGTTGAATATAGGAGGCGCAGGCGCCACCAACTGAGTAGTCAATCCCCGCCATTATTGAACTCTGTCCAAAGGTTTGGAAGCAGTGACAATTCGAGTTCCGGTTCAAGGGAGAATTCTGGGCATTACGAGAGTTTTCCGCTATTCCATGAGGAGGGTGCAAGTAGCACTGCAAAGCATCTGGAATCAGCCAATACAATGTTTTCATTTGTTTGGTGGATCATTGGATTTTACTGGGTGTCCTCTAGTACTCAAGCTTTAGCCATTGATTCTCCTCAGCTTTACTGGCTATGTATTGTTTTCCTTGCTTTTGATGTTTTCTTTGTCATTTTCTGCGTCGCACTGGCGTGCATTATTGGCATTGCTGTTTGTTGTTGTCTTCCATGTATCATTGCTCTTCTTTATGCAGTTGCAGACCAGGAAGGGGCAACAAAACAAGACATTGAGCAGTTGTTAAAATTCAAATTCCGTAGAATAGACAAAGAGAAAGTTGCCGGTAGTACACAGGGTCCTTTGGGAGGTGTGATGACTGAATGTGGCACTGATTTACCCACTGATCGCGTTCTTTCTGAGGAGGATGCGGAATGTTGCATCTGCCTTTCAGCTTATGAGGATGGGGTTGAACTAAGAGAACTTCCTTGTGGTCACCATTTTCATTGTGCCTGCGTGGACAAGTGGCTGTATATAAACGCAACTTGCCCTCTTTGCAAGTATAATGTTTTGAAGGGTAGCATCAATGGTCAGGAGGAAGTTTAG 1167 0.4662 MDSSRSMERSSDDIVDSTPFLGNSGSSSDELHPGRRFVRRQGLRQAARFLRQASSRRMMMREPSMMVREAAAEQLEERQSDWAYSKPVVILDIIWNFAFVIVAATVLVMSRNESPRVPLRLWIVGYAIQCLLHIFCVCVEYRRRRRHQLSSQSPPLLNSVQRFGSSDNSSSGSRENSGHYESFPLFHEEGASSTAKHLESANTMFSFVWWIIGFYWVSSSTQALAIDSPQLYWLCIVFLAFDVFFVIFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKQDIEQLLKFKFRRIDKEKVAGSTQGPLGGVMTECGTDLPTDRVLSEEDAECCICLSAYEDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNVLKGSINGQEEV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0586 388 ProSiteProfiles Zinc finger RING-type profile. 333 374 IPR001841 -
Mibi10g0586 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 318 381 IPR013083 -
Mibi10g0586 388 MobiDBLite consensus disorder prediction 1 33 - -
Mibi10g0586 388 CDD RING-H2_RNF111_like 332 376 - -
Mibi10g0586 388 MobiDBLite consensus disorder prediction 16 30 - -
Mibi10g0586 388 PANTHER TARGET OF ERK KINASE MPK-1 54 378 - -
Mibi10g0586 388 FunFam E3 ubiquitin-protein ligase At1g12760 319 384 - -
Mibi10g0586 388 SMART ring_2 333 373 IPR001841 -
Mibi10g0586 388 SUPERFAMILY RING/U-box 324 378 - -
Mibi10g0586 388 Pfam Ring finger domain 332 374 IPR001841 -
Mibi10g0586 388 MobiDBLite consensus disorder prediction 158 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0586 Mibi-ChrMibi10 12962405 12966687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0586 24 386 C3H Transcription Factor Family AT1G68070 49.315 1.91e-115 338