Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0582 ATGCCCATGATCATGGAAGCAGATATCTTACAGGAGCATTTATGGAATTCAAATCCCGCCATATTGACCTCCCAATTCTCAAATCGCAGCTTAGTTTCCAAGACATCTCATTGGTCCACTCTGAGACTAACTAAACACCTGTCCGTACATGATAGCTTCCCTGGCCAACCTCTGATACGTGGCAGGAAATTGTTAGCTCTCGATTTTCTTATACAGAGTCACATAAAATATAAAAAGCAGTGTAGTGACCCCCTTGAGAATAAACTATTACGTAGCGGATCTCAGAATCGGAGAGGCTTATTCGGAGAGACTTCAATGGCCGACGGAGAGAAGAAAGACAATCTTTACCAGGCAGTGTTGGATCGATGTCAAAGTTTAGAGGCAAAACAAGCGAAGCTACAAGAACAGTTCAATGAGCTTATACAAGAAAAGAATTCGAAGGTGAAAGATATTGAGGAAGACGACGTTGTTGAAGATTCAAATATGAGTTTGGTTTCTGGATTCTTCTCGACTGGTAGTCCGTACAAAAGCGTTTTGGAATGTATGGGTAACGCTGTTTTTGTGTATAACGCGTCGCCCGGAGAGATCATTTACTGGAACCATTCAGCAGAGACTCTGTACGGATGGAAGAAGCACGAAATCATTGGTCAAAGAGTTGCTGAGCTCTTGATAACTGAAGAATATCATGCACCTTTAAGAAAAATTCTAAAAAGGTTGACCTCTGGTTCGCCATGGTCAGGGCAGTTTCCTTTTAAGAAGAGGGCTGGTGAATTATTTATGGCAATGGTGACAAAATCTCCTCTCTATGAAGATGGTGAACTCACTGGTGTTGTCACAGTTTCAAGTGATGCAGCCTTATTTAATGGTATAGGTTCTGAAAATATGAGAACTAACCATGACCAATCTGGTGCTAATGGAGTATATGGAGCACATAAGTTAAACTTCAAGAGGATACAGTGGCATCCCCCGCCATTGATCGCACCCGTGCCACAGATTGCATCATCTGTTTCCAATTTGGCATCAAAGCTTCTAGGACGACATACAGATGATACATGCAATGTTAGTATGGTTTCCAGGGATACATCAACACACGGGGAAGTTGATAGAGAAGAGAAGCGCAGTATATTTGCGGCCAGTGTCTTTGCTAAGCTGCAGATGAGAAGAAGTGAAAAATGTGGGAAGGATAATGTAAGTGTGAAAAATAATTGCTCATTTGACGATTTAGCTAGCAAAGAAATGAATAACAAAAATGAATTGGCTGGAGGTTCACGGGCACTAAGCTCGCACCAGAATGCTCCAAATAGAGAAGAGAAGGGAGAAAACCTCAATAGAACTAATTCTTCTTTTGCTAAAGAGACAGCATGCTCAAAAGCTCCTGGATGTACAACTTTTCATGTTTCCTGGGATTGTTCTGTCACTACTTCCTCAGGAGATTTCCATGAATGTCTTGGTTCTTCTGTTCATGAACATCCATTGCTAAGATTTTTCTCTTCTTGCGACCCAAAGAATTTCGAGCCAGATGCAACAAATTCAGTGACAGAAGATGACGTGCAAAAGCAGCAAGAAAAAGTGCAATTACCAGGCTCCAGGGATAGTACAGGAAGCTTTGGTAGTTCATCAAGCAAAGGGGATAATGAGTTAAATGTAGCTGTAGAGTGTGAAATCCGATGGGAAGATCTTCAACTAGGAGAGGAGATTGGACATGGCTCTTATGCTACTGTTCACCGAGGGATTTGGAATGGATCGGATGTTGCTGTGAAGATTTACTTTGGCAATGGATACACTGAGGATACATTAAAAGACTACACAAAAGAGATTGATATAATGAAGAGATTGAGACATCCTAATGTTTTGCTGTTCATGGGAGCAGTATATTCACAGGAAAGGGTTGCCATAGTCACAGAGTTTTTACCAAGGGGAAGCCTCTTCAAAACTCTTCACACGAACAATCAGACATTAGACCTCAGAAAGCGTCTAAAGATGGCTCTTGATGTTGCAAAAGGGATGAATTACCTTCATCACAGAAATCCACCAATTGTGCATAGAGACTTGAAGTCTTCTAACCTTCTGGTCGGCAAAAACTGGACGGTTAAGGTTGGAGACTTTGGCTTGTCAAGGTTGAAAGATGGAACTTTCTTGAATACAATATCTGGCAGAGGCACTCCTCAGTGGATGGCTCCAGAAGTCCTTCGAAACGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGCGTCATCCTTTGGGAGCTAATGACCCAATCTGTTCCTTGGAACAGTTTAAATTCCTTGCAGGTTGTTGGAGTTGTGGCCTTTATGGATAGAAGACTGGACCTGCCGGAGGGGATTGATCCCCACGTAGAAAAAATCATTCGTGATTGCTGGCACAGTGATCCAGAGCAACGTCCCTCATTTGAAGATCTAATACAGAGAATGATGTCACTAATCAGCAGAGTAACAGCCATGTCTGTCAAGAGGATTTCAGCATCCTAA 2493 0.4208 MPMIMEADILQEHLWNSNPAILTSQFSNRSLVSKTSHWSTLRLTKHLSVHDSFPGQPLIRGRKLLALDFLIQSHIKYKKQCSDPLENKLLRSGSQNRRGLFGETSMADGEKKDNLYQAVLDRCQSLEAKQAKLQEQFNELIQEKNSKVKDIEEDDVVEDSNMSLVSGFFSTGSPYKSVLECMGNAVFVYNASPGEIIYWNHSAETLYGWKKHEIIGQRVAELLITEEYHAPLRKILKRLTSGSPWSGQFPFKKRAGELFMAMVTKSPLYEDGELTGVVTVSSDAALFNGIGSENMRTNHDQSGANGVYGAHKLNFKRIQWHPPPLIAPVPQIASSVSNLASKLLGRHTDDTCNVSMVSRDTSTHGEVDREEKRSIFAASVFAKLQMRRSEKCGKDNVSVKNNCSFDDLASKEMNNKNELAGGSRALSSHQNAPNREEKGENLNRTNSSFAKETACSKAPGCTTFHVSWDCSVTTSSGDFHECLGSSVHEHPLLRFFSSCDPKNFEPDATNSVTEDDVQKQQEKVQLPGSRDSTGSFGSSSSKGDNELNVAVECEIRWEDLQLGEEIGHGSYATVHRGIWNGSDVAVKIYFGNGYTEDTLKDYTKEIDIMKRLRHPNVLLFMGAVYSQERVAIVTEFLPRGSLFKTLHTNNQTLDLRKRLKMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVGKNWTVKVGDFGLSRLKDGTFLNTISGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTQSVPWNSLNSLQVVGVVAFMDRRLDLPEGIDPHVEKIIRDCWHSDPEQRPSFEDLIQRMMSLISRVTAMSVKRISAS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0582 830 SMART pas_2 173 240 IPR000014 -
Mibi10g0582 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Mibi10g0582 830 MobiDBLite consensus disorder prediction 522 544 - -
Mibi10g0582 830 SUPERFAMILY Protein kinase-like (PK-like) 551 816 IPR011009 -
Mibi10g0582 830 Pfam PAS domain 184 283 IPR000014 -
Mibi10g0582 830 ProSiteProfiles PAS repeat profile. 171 243 IPR000014 -
Mibi10g0582 830 Pfam Protein tyrosine and serine/threonine kinase 560 811 IPR001245 GO:0004672|GO:0006468
Mibi10g0582 830 MobiDBLite consensus disorder prediction 506 544 - -
Mibi10g0582 830 SMART serkin_6 560 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0582 830 ProSitePatterns Protein kinases ATP-binding region signature. 566 587 IPR017441 GO:0005524
Mibi10g0582 830 Gene3D Transferase(Phosphotransferase) domain 1 639 825 - -
Mibi10g0582 830 Gene3D Phosphorylase Kinase; domain 1 553 637 - -
Mibi10g0582 830 MobiDBLite consensus disorder prediction 421 445 - -
Mibi10g0582 830 FunFam PAS domain-containing protein tyrosine kinase family protein 638 828 - -
Mibi10g0582 830 FunFam Serine/threonine-protein kinase isoform 1 551 638 - -
Mibi10g0582 830 CDD STKc_MAP3K-like 566 812 - -
Mibi10g0582 830 CDD PAS 182 283 IPR000014 -
Mibi10g0582 830 Coils Coil 116 154 - -
Mibi10g0582 830 SUPERFAMILY PYP-like sensor domain (PAS domain) 175 283 IPR035965 -
Mibi10g0582 830 ProSiteProfiles Protein kinase domain profile. 560 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0582 830 PRINTS Tyrosine kinase catalytic domain signature 720 730 IPR001245 GO:0004672|GO:0006468
Mibi10g0582 830 PRINTS Tyrosine kinase catalytic domain signature 783 805 IPR001245 GO:0004672|GO:0006468
Mibi10g0582 830 PRINTS Tyrosine kinase catalytic domain signature 634 647 IPR001245 GO:0004672|GO:0006468
Mibi10g0582 830 PRINTS Tyrosine kinase catalytic domain signature 673 691 IPR001245 GO:0004672|GO:0006468
Mibi10g0582 830 PRINTS Tyrosine kinase catalytic domain signature 739 761 IPR001245 GO:0004672|GO:0006468
Mibi10g0582 830 TIGRFAM sensory_box: PAS domain S-box protein 175 283 IPR000014 -
Mibi10g0582 830 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 353 815 - -
Mibi10g0582 830 Gene3D PAS domain 183 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0582 Mibi-ChrMibi10 12393633 12400622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0582 106 818 MAP Kinase Kinase Kinase AT4G23050 45.382 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi10g0582 PK_Tyr_Ser-Thr 2.8e-67 CL0016