Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0572 ATGGCCTCATCTTCATGTTCCAAGAGGCATCCTGTGTACCGTGGAATCCGGTGCCGTGGAGAAAAATGGGTGTCGGAGATCCGGGAACCCCGTAAGCCATCGCGTATTTGGCTCGGGACATTTCAGACGCCGGAGATGGCAGCGGCTGCTTATGATGTGGCAGCGTTGGCTCTGAAGGGCAAGGACGCTGTTCTCAACTTCCCTGAGTTGGCCGGACGATATCCCGTCCCGGTTTCCGCTTCCGCTTCTCATATTCGTAGTGCTGCAGCCGCGGCTGCCTCAGTAGTGAACTCAGAAGCCATTTCCAGGAGTGTCATGCACAAACACATTGATGAGTCTTCTTCATCTGTTAATGGAATTAATGTTGATGAATGTTATAATGACAGGGCCATCTCAATCTCATCTGGAACAGAAGATCATCAGCAATTTGTGGACGAGGATGCCATTTTTGGTATGCCTAGTTTGCTCCTTGAAATGGCACAAGGAATGTTGATGTCCCCTCCCAGAATCACGCCTCCACCACCGGAAAACTCTCCTGCAGATTGTTTGTGGAACTACTTTTAA 564 0.5018 MASSSCSKRHPVYRGIRCRGEKWVSEIREPRKPSRIWLGTFQTPEMAAAAYDVAALALKGKDAVLNFPELAGRYPVPVSASASHIRSAAAAAASVVNSEAISRSVMHKHIDESSSSVNGINVDECYNDRAISISSGTEDHQQFVDEDAIFGMPSLLLEMAQGMLMSPPRITPPPPENSPADCLWNYF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0572 187 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 161 - -
Mibi10g0572 187 CDD AP2 13 70 IPR001471 GO:0003700|GO:0006355
Mibi10g0572 187 Pfam AP2 domain 11 60 IPR001471 GO:0003700|GO:0006355
Mibi10g0572 187 FunFam Ethylene-responsive transcription factor 2 11 69 - -
Mibi10g0572 187 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
Mibi10g0572 187 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
Mibi10g0572 187 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Mibi10g0572 187 SUPERFAMILY DNA-binding domain 12 69 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0572 Mibi-ChrMibi10 12113042 12113605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0572 2 186 AP2-EREBP Transcription Factor Family AT5G52020 47.396 1.27e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0572 AP2 7.6e-09 CL0081