Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0570 ATGAGACAACACACAATGAAAGCTTCTTTTTCATCTTCGTCAGAGGTGAGCTCGTCGTCAAGCGGAGAGCCGATAATGTTACTGGCGTCGGAGCGACCCAAGAAGCGAGCGGGACGGAGGGTTTTCAAGGAGACGAGGCATCCCATTTACAGAGGAGTACGACGGAGGAACAACGACAAGTGGGTTTGTGAGGTTCGTGTGCCTAACGGTAACACCAGGATTTGGCTCGGAACATATCCAACGGTGGAGATGGCCGCTCGTGCTAATGACGTGGCAGCACTGGCTCTACGTGGCAAGTCAGCTTGCCTGAATTTTGCTGACTCAGCATGGCGGTTGCCCACACCGGAGTCAACCAATGCGGCCGAGATCAGGCGGGTGGCGGCTATGGCTGCTCAGGAATTCGGCGGGAGTATGGATGATACTGAGGTTTGCAGTAGCAGTATTACAACGGTCAACGACGACGTCATCGGAGAATCCTGTAACGTACAGAACTACAGTGAGGAAGAAGAAACGTGTATTGGTCAAACTCGGGCAGTGTCTACGGAGTTTGACGAGCTCCGCCATTGGATTGTGAGTATGGCAGAGGAGCCTATCCGATCACCACTCTCTGTTAGGCCATATGGGTGGTTTTGGAATGACATGGAGGTTGATACTGAGGTGTCACTTTGGCAGTATTGA 678 0.5236 MRQHTMKASFSSSSEVSSSSSGEPIMLLASERPKKRAGRRVFKETRHPIYRGVRRRNNDKWVCEVRVPNGNTRIWLGTYPTVEMAARANDVAALALRGKSACLNFADSAWRLPTPESTNAAEIRRVAAMAAQEFGGSMDDTEVCSSSITTVNDDVIGESCNVQNYSEEEETCIGQTRAVSTEFDELRHWIVSMAEEPIRSPLSVRPYGWFWNDMEVDTEVSLWQY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0570 225 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Mibi10g0570 225 MobiDBLite consensus disorder prediction 1 39 - -
Mibi10g0570 225 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Mibi10g0570 225 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Mibi10g0570 225 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Mibi10g0570 225 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mibi10g0570 225 MobiDBLite consensus disorder prediction 1 25 - -
Mibi10g0570 225 CDD AP2 48 108 IPR001471 GO:0003700|GO:0006355
Mibi10g0570 225 Pfam AP2 domain 48 98 IPR001471 GO:0003700|GO:0006355
Mibi10g0570 225 SUPERFAMILY DNA-binding domain 49 108 IPR016177 GO:0003677
Mibi10g0570 225 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 8 225 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0570 Mibi-ChrMibi10 11982674 11983600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0570 26 225 AP2-EREBP Transcription Factor Family AT1G12610 50.000 5.91e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0570 AP2 8.7e-13 CL0081