Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0568 ATGGACTTTTTCAGACAACACACAATAAAAGCTTCTTCTTCGTCTTCATCAGAGGTGAGCTCGTCAAGCAGAGAGCCGATAATGTTACTGGCGTCGGAGCGACCCAAGAAGCGAGCGGGACGGAGGGTTTTCAAGGAGACAAGGCATCCCATTTACAGAGGAGTACGACGGAGGAACAACGACAAGTGGGTTTGTGAGGTTCGTGTGCCTAACGGTAACACCAGGATTTGGCTCGGAACATATTCCACAGAGGAGATGGCCGCTCGTGCTCATGACGTGGCAGCACTGGCTCTACGTGGCAAGTCAGCTTGCCTGAATTTTGCTGACTCAGCATGGCGGTTGCCCACACCGGAGTCAACCAATGCGACCGAGATCAGGCGGGTGGCGGCTCTGGCTGCTCATGAATTTAGCCGGAGTACGGATGATTCTGAGGTTTGCAGTAACAGTATTACCACGGTCAACGACGACGTCATAGGAGAATCGTGTAATGTACATAACTACAGTGAGGAAGAAGAAACATGTATTGATCAAACTCCGGCAGTGTCGACGGAGTTTGACGAGTTCCGTCAGTGGCTTGTGAGTATGGCGCAGGAGCCTCTCCGATCACCACTGACTATTAGGCCATATGGGTGGAGTTGGAATGACGTGGAGGTTGATACTGAGGTGTCCTTGTGGCAGTATTGA 684 0.5146 MDFFRQHTIKASSSSSSEVSSSSREPIMLLASERPKKRAGRRVFKETRHPIYRGVRRRNNDKWVCEVRVPNGNTRIWLGTYSTEEMAARAHDVAALALRGKSACLNFADSAWRLPTPESTNATEIRRVAALAAHEFSRSTDDSEVCSNSITTVNDDVIGESCNVHNYSEEEETCIDQTPAVSTEFDEFRQWLVSMAQEPLRSPLTIRPYGWSWNDVEVDTEVSLWQY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0568 227 Pfam AP2 domain 50 100 IPR001471 GO:0003700|GO:0006355
Mibi10g0568 227 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 227 IPR045277 GO:0003700
Mibi10g0568 227 Gene3D AP2/ERF domain 51 109 IPR036955 GO:0003700|GO:0006355
Mibi10g0568 227 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Mibi10g0568 227 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Mibi10g0568 227 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Mibi10g0568 227 CDD AP2 50 110 IPR001471 GO:0003700|GO:0006355
Mibi10g0568 227 SUPERFAMILY DNA-binding domain 51 110 IPR016177 GO:0003677
Mibi10g0568 227 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Mibi10g0568 227 FunFam Ethylene-responsive transcription factor 2 50 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0568 Mibi-ChrMibi10 11972881 11973564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0568 28 227 AP2-EREBP Transcription Factor Family AT1G12610 51.442 8.13e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0568 AP2 1.2e-13 CL0081