Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0556 ATGGCATCGTATAGGGAATATGAGAAGGATCACGACGGCGACTCAGAGCTCAGTAATATGGCCAGTGATCAAGAACAAGACCCTACAACCATCAGTACCAACCATGAGGAAACAAGTAATACGACGGCGTTTCAAGTTTTGCCGTTGAAGAACGAGCCAAACGAGTCGGACTCAGACCGAAAGAGTGAGGCTCATCACACGGCGATGCATACGGATATGCCAATGCATTTGCCAGCGCCGACAAATCGACGGCCATCAACGAAGGATCGTCACACCAAGGTGGAAGGTCGTGGACGTAGGATCCGAATACCCGCCACGTGTGCGGCCAGGATCTTTCAGCTCACTCGGGAGTTAGGCCACAAGTCCGACGGCGAAACCGTACGGTGGCTCCTCGAACACGCCGAACAAGCCATCATCGAAGCCACCGGCACAGGCACTGTACCAGCGATCGCCGTCTCTGTCGGTGGAACCCTTAAGATTCCAACGACGTCTAGTAATAATTCCAATGACGAAGCCAATAAGAAACGGAGACGACCGTCAAATAGCGAGTTTGTGGACGTAAACGACGCCGTTTCGCATTCTTACGGTTTGGCGCCGGTCCAACCGGTCCAACAGGCGGTTCCTCAAGGGCTGGTTCCGGTTTGGGCTGTGGGGAATACAGGTATGGTGGTCCCAGCGAACGCCTTCTGGATGATTCCATCGGCGAATCAACAACCTCAGGTATGGGCTTTGTCTCCAAATGTATACAATATGTCGGCGAGAGTTATGGAAGGAACATCAAGTATTTCTACTGGAGTGGAAGTTTCTGGTGCCGGCAGGTCTAATTCAGGGGTGAGTACTAGCATGGTGGGGCATAAGGTGGCGAAGAGTTCAACAATGGCACCAAGCGTGAGCTCAAGTGGGAGTATTAGTGGAAGCAAGGCTCAGAAGTTGAGGGATTTTTCTTTGGAGATTTGCGATAAGCAGGAATTGCAGTTAATGGGTCGGCGATCAGAGGAGGAAGCGGCAGAAGATTTGAAACGGTGA 1026 0.5185 MASYREYEKDHDGDSELSNMASDQEQDPTTISTNHEETSNTTAFQVLPLKNEPNESDSDRKSEAHHTAMHTDMPMHLPAPTNRRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSNNSNDEANKKRRRPSNSEFVDVNDAVSHSYGLAPVQPVQQAVPQGLVPVWAVGNTGMVVPANAFWMIPSANQQPQVWALSPNVYNMSARVMEGTSSISTGVEVSGAGRSNSGVSTSMVGHKVAKSSTMAPSVSSSGSISGSKAQKLRDFSLEICDKQELQLMGRRSEEEAAEDLKR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0556 341 MobiDBLite consensus disorder prediction 53 70 - -
Mibi10g0556 341 ProSiteProfiles TCP domain profile. 87 141 IPR017887 -
Mibi10g0556 341 MobiDBLite consensus disorder prediction 19 52 - -
Mibi10g0556 341 MobiDBLite consensus disorder prediction 1 18 - -
Mibi10g0556 341 Pfam TCP family transcription factor 86 168 IPR017887 -
Mibi10g0556 341 MobiDBLite consensus disorder prediction 1 96 - -
Mibi10g0556 341 MobiDBLite consensus disorder prediction 289 309 - -
Mibi10g0556 341 MobiDBLite consensus disorder prediction 158 184 - -
Mibi10g0556 341 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 323 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0556 Mibi-ChrMibi10 11466935 11467960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0556 80 327 TCP Transcription Factor Family AT2G45680 49.104 2.83e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi10g0556 TCP 1.8e-28 No_clan