Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0529 ATGAAAGGGGTCAGTCAGAAAATTCGCCACTTTGTTCATGTTCTTCTGTTTGCTGCTCTTTTCTCACTTTCCTCTTTCACAGTCTCGTCATCACCAGAATCTGAAAAGGAAATTCTGCTTCAATTCAAGGGGAATGTCACTGATGACCCTTATAACAGCTTGAGTTCATGGGAATCAAGTGGAAACCCATGTGAAGTTTTCATGGGTGTCTCTTGTAATTTAGAAGGATTTGTAGAAAAAATAGTTCTTTGGAACACTAGCTTAGCTGGAGTTTTTTCGCCAGCATTGTCCCAGTTAAAATTGTTGAAGGTTTTGACATTGTACGGGAATCGTTTTTCTGGTAAAATCCCAGAAGAATACACTGAGTTTCAATCATTATGGAAGATAAATTTGAGCTCTAATGCATTATCTGGTCCAATCCCAGACTTCATAGGTAATATAAAGAGCTTACGTTTTCTTGATTTGTCACTAAATGGCTTTTCTGGGGAGATTCCATCAGCTTTGTTTAAATACTGCTACAAAACCAAGTTCCTTTCTCTTTCTTACAACAATCTTTCAGGTTCAATTCCATCTTCCATAGTGAATTGCTTGAACCTTGAAGGTTTTGATTTTTCCTTCAACAATCTCACTGGGAGTATTCCTTTAAGACTATGTGATATTCCAAGGTTATCATATGTTTCACTGAGGAATAATGCCTTCTCTGGGACAAAGCAAGATCAGATTTTCTCAGAATGTCATAGTTTGGCGTATGTAAATCTTGCTAGGAACATATTCAGTGGTTCTGCACCATTCAACATCCTTGAAAAGAAAAATCTTACTTATTTCAATATATCATATAATGGATTCAGTGGGCATATTCCTGAGATAAGTGCATGTAGTGATAGATTAGAATTTTTGGATGCTTCAGGGAATGATTTGGATGGGGAGATTCCACTGAGCATAACAGGATGCAAAAAGCTCAAGCTTTTGGCCTTGGAGGTAAATAGGCTGATAGGGACTATCCCATTGGGAATTCAAGAATTGAAGAGTCTATTAGTTGTTAAACTAGGTGATAATTCAATTGGTGGAATCATTCCTAAGGGATTTGGTAACATTGAACTGCTTGAGATTCTGGATCTGCACAATCTAAACCTCACTGGTGAAATTCCAAATGATGTAAGCAATTGCAGGTTTCTTCTTGAGTTGAATGTTTCTGGTAATAACTTAGAGGGAGAGATTCCTCAAACTCTTTATAACATGACAAATATGGAGGTTCTTGACCTACATCAAAACAAGCTCAATGGAAGCATCCCACCCGGCCTAGGAAACTCATCAAGCATTAAATACCTAGATTTATCTCATAATTTTCTTTCTGGTTCAATCCCTTCCCTTGAAAACTTAAGATACTTGATATATTTTAATTTGTCATTCAACAATCTCTCTGGTGTCATTCCTCCTATCGCAACCATACAGGGTTTTGGTTCATCTGCATTTTCCAACAATCCTTTTCTCTGTGGTTCTCCTTTAGATGATAATACCTCTTGCTCAGAAAATGGCACAAATTATTCGTCTTCAGCTTCTAGGAAAACTAAAGTGCTTAGTGTTTCTGCAATTGTTGCCATTGTTGCTGTAGCCATCATTCTTTCTGGGGTTTGTTTGGTGGTCATTTTGAACACTAAGATTTATAACAGAAAGAAAGAAGATCAGACAACGATTGTTGAGAGCACACCTCTTGGATCAACAGAATCAAATGTTGTAATTGGGAAGCTGGTTCTCTTCAACAAAAGCTTACCATCAAAAATTGAAGATTGGGAAGCAGGAACAAAAGCATTGCTTGACAAGGAATCTTTGATTGGCGCCGGATCAATTGGTACAGTGTACAAAACAAACCTTGAAGGTGGGGTGTCAGTTGCAGTCAAAAAGATTGAAACTTTGGGAAGCATCAGAAGCCAGCATGAATTTGAACGTGAAATAATTCAACTAAGCAGCCTCAGACACCCAAATTTAGTTTCTTTTCAAGGTTACTATTGGTCCCCAACAATGAAAATGATCCTATTAGAGTTTGTCTCAAATGGTAATCTCTTTGATAATCTACATGGCAACATTAAACAACTAGATTGGTCCAGAAGGTTACAGATTGCACTGGGAACAGCAAGAGCTCTTGCCTATCTCCACCATGACTGTAAACCTCCAATTCTGCATCTCAACCTCAAATCCTCAAACATACTCTTAGACAACATGTATAGAGCAAAGCTATCAGACTATGGCCTAAACAAGTTACTTCCTATGAACGATTATTATGGTGGCACTTATTTCCACAATTCGGTAGGGTACATTGCACCAGAATTGGCTATGAGCTTAAGGCAGAGCGAAAAATGTGATATTTTTAGTTTTGGGGTGATTCTGTTGGAGCTGGTCACAGGGAAGAAGCCTGTAGAAAGTGGTGTAGCAGCAGAAAATGATGGAGGGGTGGTGGTGTTGTGTGAGTATGTGAGAGTGTTGTTGGAGAGTGGTTCTGCTTCAGATTGCTTGGATAGAAGGTTGATAGGCTTGGCTGAGAGTGAATTTATTCAAGTTATGAGAATGGGATTGATTTGTACTTCAGAAGATCCTTCTAGAAGACCAACCATGGCTGAGATTGTTCAGTTCCTTGAGTCTATTGAAATTGCATCAGAATCAGGTTCATCTTATTGA 2673 0.3835 MKGVSQKIRHFVHVLLFAALFSLSSFTVSSSPESEKEILLQFKGNVTDDPYNSLSSWESSGNPCEVFMGVSCNLEGFVEKIVLWNTSLAGVFSPALSQLKLLKVLTLYGNRFSGKIPEEYTEFQSLWKINLSSNALSGPIPDFIGNIKSLRFLDLSLNGFSGEIPSALFKYCYKTKFLSLSYNNLSGSIPSSIVNCLNLEGFDFSFNNLTGSIPLRLCDIPRLSYVSLRNNAFSGTKQDQIFSECHSLAYVNLARNIFSGSAPFNILEKKNLTYFNISYNGFSGHIPEISACSDRLEFLDASGNDLDGEIPLSITGCKKLKLLALEVNRLIGTIPLGIQELKSLLVVKLGDNSIGGIIPKGFGNIELLEILDLHNLNLTGEIPNDVSNCRFLLELNVSGNNLEGEIPQTLYNMTNMEVLDLHQNKLNGSIPPGLGNSSSIKYLDLSHNFLSGSIPSLENLRYLIYFNLSFNNLSGVIPPIATIQGFGSSAFSNNPFLCGSPLDDNTSCSENGTNYSSSASRKTKVLSVSAIVAIVAVAIILSGVCLVVILNTKIYNRKKEDQTTIVESTPLGSTESNVVIGKLVLFNKSLPSKIEDWEAGTKALLDKESLIGAGSIGTVYKTNLEGGVSVAVKKIETLGSIRSQHEFEREIIQLSSLRHPNLVSFQGYYWSPTMKMILLEFVSNGNLFDNLHGNIKQLDWSRRLQIALGTARALAYLHHDCKPPILHLNLKSSNILLDNMYRAKLSDYGLNKLLPMNDYYGGTYFHNSVGYIAPELAMSLRQSEKCDIFSFGVILLELVTGKKPVESGVAAENDGGVVVLCEYVRVLLESGSASDCLDRRLIGLAESEFIQVMRMGLICTSEDPSRRPTMAEIVQFLESIEIASESGSSY 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0529 890 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Mibi10g0529 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 683 884 - -
Mibi10g0529 890 ProSiteProfiles Leucine-rich repeat profile. 439 461 IPR001611 GO:0005515
Mibi10g0529 890 CDD STKc_IRAK 611 880 - -
Mibi10g0529 890 ProSiteProfiles Protein kinase domain profile. 605 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0529 890 Pfam Protein kinase domain 607 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0529 890 Pfam Leucine rich repeat 394 448 IPR001611 GO:0005515
Mibi10g0529 890 Gene3D Ribonuclease Inhibitor 241 516 IPR032675 -
Mibi10g0529 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 219 519 - -
Mibi10g0529 890 Gene3D Ribonuclease Inhibitor 31 174 IPR032675 -
Mibi10g0529 890 SUPERFAMILY L domain-like 32 289 - -
Mibi10g0529 890 Gene3D Ribonuclease Inhibitor 175 240 IPR032675 -
Mibi10g0529 890 Gene3D Phosphorylase Kinase; domain 1 586 682 - -
Mibi10g0529 890 SUPERFAMILY L domain-like 242 502 - -
Mibi10g0529 890 Gene3D Transferase(Phosphotransferase) domain 1 683 888 - -
Mibi10g0529 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 582 681 - -
Mibi10g0529 890 SUPERFAMILY Protein kinase-like (PK-like) 607 879 IPR011009 -
Mibi10g0529 890 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 178 877 - -
Mibi10g0529 890 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 32 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0529 Mibi-ChrMibi10 10470773 10473679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0529 11 886 Receptor kinase-like Gene Family AT1G62950 59.978 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mibi10g0529 Pkinase 2.2e-38 CL0016