Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0490 ATGGGAAGACAACCTTGCTGTGACAAACTTGAAGTGAAGAAAGGACCATGGACTGCTGAAGAAGACAAAAAGCTCATCAACTTCATTTTCACTAATGGTCACTGTTGCTGGCGAGCCGTCCCCAAGCTCGCCGGCCTCAGGCGATGTGGCAAGAGTTGTAGGCTTCGTTGGACTAACTATCTTCGTCCTGACTTGAAGAGAGGCCTACTCACTGATGCAGAAGAGAACCTTGTCATCGATCTCCATTCTCGCCTTGGAAACAGGTGGTCTATGATAGCTGCAAAATTACCAGGAAGAACAGACAATGAGATTAAAAATCATTGGAATACTCACATCAAGAAGAAGCTGCTTAAGATGGGTATTGATCCTGTAACTCACAAGCCTCTCAACAAAGAGGAAGCTTCTTCCCACGATGATTCATCCCCTCCAGAGAATTTGTCACAAACTGACAGTGACAATCATCATCTTCAGGTGAATCTTCTCAACTCAAAGGAGAATTCAACCTCATCACCAACTGAAAATTCATGTGGGGATGAACAACTTTTGCAAGAAATCAATCTCTCAAACAATTCCTGGCCGGACAAAAAAACTTCACTGGTGGATGAGTTATGGGAAAGTATACCAGATGCACAGAATCTGAATTATGACTTAGAAATATCATCTTGGGAGGATAGTAATTCCTGGTTCTTTGACTCTCTGGACTTTGGTTTTAATTGCTTCAATGAGATTGAGCCTCAGGCCCTCCAGATATCTGGAATGGTAGAGAAGGAACATTAG 777 0.4299 MGRQPCCDKLEVKKGPWTAEEDKKLINFIFTNGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTDAEENLVIDLHSRLGNRWSMIAAKLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHKPLNKEEASSHDDSSPPENLSQTDSDNHHLQVNLLNSKENSTSSPTENSCGDEQLLQEINLSNNSWPDKKTSLVDELWESIPDAQNLNYDLEISSWEDSNSWFFDSLDFGFNCFNEIEPQALQISGMVEKEH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0490 258 Gene3D - 70 145 - -
Mibi10g0490 258 Gene3D - 11 67 - -
Mibi10g0490 258 FunFam MYB transcription factor 11 67 - -
Mibi10g0490 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi10g0490 258 MobiDBLite consensus disorder prediction 127 151 - -
Mibi10g0490 258 CDD SANT 71 112 IPR001005 -
Mibi10g0490 258 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi10g0490 258 PANTHER F14D16.11-RELATED 1 186 - -
Mibi10g0490 258 FunFam transcription factor MYB80 69 129 - -
Mibi10g0490 258 SMART sant 66 114 IPR001005 -
Mibi10g0490 258 SMART sant 13 63 IPR001005 -
Mibi10g0490 258 CDD SANT 16 61 IPR001005 -
Mibi10g0490 258 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mibi10g0490 258 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi10g0490 258 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi10g0490 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi10g0490 258 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0490 Mibi-ChrMibi10 9091328 9092251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0490 1 249 MYB Transcription Factor Family AT4G12350 53.737 3.39e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0490 Myb_DNA-binding 1.1e-13 CL0123