Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0484 ATGGCCGACGAAGCAAAGGCCAAAGGTAATGCAGCTTTCTCTTCCGGCGATTTCTCCGCCGCCATCCGTCACTTCTCCGACGCCATCTCTCTCTCCCCTAACAACCACGTCCTCTATTCCAACCGATCCGCCGCCTACGCTTCCCTTCACAAATACTCCGACGCCTTAGCCGACGCCAAGAAAACCGTTGACCTCAAGCCGGATTGGCCCAAGGGTTACAGTCGGCTCGGCGCCGCTCATCTTGGCCTCAACCAACATGATGAAGCAATCGCTGCTTACAATAAAGGCCTCGAAATCGATCCAAATAATGAGATTCTCAAATCCGGCTTGGCCGATGCCCGGTCGGCGGCGTCGTCGGCGTCGGCGAGGTTTCGGCCGGGGGCGGCGGCTCCGAATAACCTTTTCGGAGACGCTTTCGCCGGGCCGGAGATGTGGGCGAGGCTTACGGCTGATCCTACGACTAGGGTTTACCTTCAGCAGCCTGATTTTGTGAAGATGATGCAGGAAATTCAGAAGAATCCTAATAATTTGAACTTGTATTTGAAGGATCAAAGGGTTATGCAGTCTCTTGGGGTTTTGCTTAATCTGAAGATTCGTAATCCAGGGGATGATGATGCTGATATGGCTGATTCTTCTTCTTCTTCAGCTTCTCAAGAGAGGAAGAGAGCTGCTGAGGCAGAGCCTGTGAAGGAAGAGAAGAAGCCAGAGCCTGAAGTGGAGCCTATGGAAGTGAGTGAAGAGGAGAGGGAAGGGAAGGAGAGGAAGGCTCAGGCTCAGAAAGAGAAGGAGGCTGGTAATGCGGCTTATAAGAAGAAGGATTTTGAAACAGCAATTCAGCATTATTCTAAGGCTTTGGAATTGGATGATGAGGATATATCGTTTCTCACAAATCGTGCTGCTGTGTACTTGGAGATGGGAAAGTTTGAAGAATGCATAAAAGATTGTGATAAGGCTGTTGAAAGGGGAAGAGAACTGAGATCAGACTACAAGATGATAGCAAGAGCTTTGACAAGGAAGGGAACTGCCTTGGTCAAACTGGCCAAATGCTCAAAGGATTATGAACCTGCCATTGAGACTTTCCAGAAAGCGCTTACAGAGCATCGCAATCCTGACACATTGAAGAGACTGAATGAAGCTGAAAAAGCTAAGAAAGAACTTGAACAGCAAGAATACTTTGATCCAAAACTGGCTGATGAGGAGCGTGAAAAAGGTAATGAATTCTTCAAGCAGCAAAAGTATCCTGAGGCTGTGAGGTGTTACACAGAATCTTTAAGAAGGAACCCTAAAGATCCTAAGACATACAGTAACAGAGCTGCTTGCTACACAAAACTTGGTGCAATGCCTGAGGGTTTGAAGGATGCAGACAAATGCATTGAGCTTGATCCAACCTTCTCAAAAGGTTATTCTAGAAAAGGTGCCATTCAGTTTTTCATGAAGGAATATGACAAAGCATTGGAAACATATCAGGAGGGATTGAAACATGACCGTAACAATCAGGAATTGCTTGATGGCATAAAACGATGTGTTGAACAAATTAACAAGGCCAGCCGTGGCGATTTATCACCTGAGGAATTGAAGGAGAGACAGGCCAAGGCAATGCATGACCCAGAAATACAGAACATCCTTCAAGATCCTGTTATGAGACAGGTGTTAGTTGATTTCCAGGAAAATCCCAAAGCTGCCCAGGAGCATACAAAGAATCCAATGGTGATGAACAAGATCCAAAAACTGGTCAGTGCTGGAATTGTCCAGATTAAGTGA 1761 0.4662 MADEAKAKGNAAFSSGDFSAAIRHFSDAISLSPNNHVLYSNRSAAYASLHKYSDALADAKKTVDLKPDWPKGYSRLGAAHLGLNQHDEAIAAYNKGLEIDPNNEILKSGLADARSAASSASARFRPGAAAPNNLFGDAFAGPEMWARLTADPTTRVYLQQPDFVKMMQEIQKNPNNLNLYLKDQRVMQSLGVLLNLKIRNPGDDDADMADSSSSSASQERKRAAEAEPVKEEKKPEPEVEPMEVSEEEREGKERKAQAQKEKEAGNAAYKKKDFETAIQHYSKALELDDEDISFLTNRAAVYLEMGKFEECIKDCDKAVERGRELRSDYKMIARALTRKGTALVKLAKCSKDYEPAIETFQKALTEHRNPDTLKRLNEAEKAKKELEQQEYFDPKLADEEREKGNEFFKQQKYPEAVRCYTESLRRNPKDPKTYSNRAACYTKLGAMPEGLKDADKCIELDPTFSKGYSRKGAIQFFMKEYDKALETYQEGLKHDRNNQELLDGIKRCVEQINKASRGDLSPEELKERQAKAMHDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLVSAGIVQIK 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0484 586 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 518 586 - -
Mibi10g0484 586 ProSiteProfiles TPR repeat profile. 431 464 IPR019734 GO:0005515
Mibi10g0484 586 Gene3D - 130 198 - -
Mibi10g0484 586 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Mibi10g0484 586 Coils Coil 369 389 - -
Mibi10g0484 586 Pfam TPR repeat 265 306 - -
Mibi10g0484 586 Pfam TPR repeat 404 445 - -
Mibi10g0484 586 SUPERFAMILY TPR-like 2 113 IPR011990 GO:0005515
Mibi10g0484 586 FunFam Putative stress-induced-phosphoprotein 1 131 199 - -
Mibi10g0484 586 PANTHER TPR REPEAT CONTAINING PROTEIN 2 558 IPR045248 -
Mibi10g0484 586 FunFam hsp70-Hsp90 organizing protein 3-like 396 510 - -
Mibi10g0484 586 SMART tpr_5 2 35 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 431 464 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 465 498 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 292 325 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 333 370 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 36 69 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 70 103 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 397 430 IPR019734 GO:0005515
Mibi10g0484 586 SMART tpr_5 258 291 IPR019734 GO:0005515
Mibi10g0484 586 Coils Coil 242 262 - -
Mibi10g0484 586 FunFam Stress-induced phosphoprotein 1 1 116 - -
Mibi10g0484 586 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Mibi10g0484 586 MobiDBLite consensus disorder prediction 220 267 - -
Mibi10g0484 586 SUPERFAMILY TPR-like 257 385 IPR011990 GO:0005515
Mibi10g0484 586 SMART CBM 141 180 IPR006636 -
Mibi10g0484 586 SMART CBM 535 574 IPR006636 -
Mibi10g0484 586 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Mibi10g0484 586 Gene3D Tetratricopeptide repeat domain 395 510 IPR011990 GO:0005515
Mibi10g0484 586 Gene3D Tetratricopeptide repeat domain 1 115 IPR011990 GO:0005515
Mibi10g0484 586 Gene3D Tetratricopeptide repeat domain 255 391 IPR011990 GO:0005515
Mibi10g0484 586 FunFam Stress-induced phosphoprotein 1 255 389 - -
Mibi10g0484 586 MobiDBLite consensus disorder prediction 201 267 - -
Mibi10g0484 586 Pfam Tetratricopeptide repeat 466 498 IPR001440 GO:0005515
Mibi10g0484 586 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Mibi10g0484 586 SUPERFAMILY TPR-like 396 509 IPR011990 GO:0005515
Mibi10g0484 586 Coils Coil 582 586 - -
Mibi10g0484 586 ProSiteProfiles TPR repeat profile. 397 430 IPR019734 GO:0005515
Mibi10g0484 586 ProSiteProfiles TPR repeat profile. 258 291 IPR019734 GO:0005515
Mibi10g0484 586 ProSiteProfiles TPR repeat profile. 465 498 IPR019734 GO:0005515
Mibi10g0484 586 Gene3D - 516 586 - -
Mibi10g0484 586 Pfam STI1 domain 142 195 IPR041243 -
Mibi10g0484 586 Pfam STI1 domain 527 578 IPR041243 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0484 Mibi-ChrMibi10 9004420 9007704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0484 1 99 U-box Gene Family AT3G07370 27.273 1.94e-06 48.1