Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0478 ATGAATACATTTTCACATGTTCCTCCGGGTTTTCGATTCCATCCCACTGATGAAGAACTCGTTGATTACTACCTCAGAAAGAAGGTAGCTTCCAAAAGGATTGATCTTGACGTCATCAAAGATGTTGATCTCTACAAAATTGAGCCCTGGGATCTTCAAGAACTGTGCAGAATTGGAAGTGAGGAACAAAATGAATGGTACTTCTTCAGCCACAAAGATAAGAAGTATCCCACAGGAACTCGAACGAATAGAGCCACAAAAGCTGGATTCTGGAAGGCAACAGGAAGAGATAAAGCCATATATTCAAGGCATTGTCTGATTGGAATGAGAAAGACACTTGTGTTTTACAAAGGAAGAGCTCCTAATGGCCAGAAATCTGACTGGATCATGCATGAATATCGCCTTGAAACCAATGAAAATGCTACTCCTCAGGAAGAAGGGTGGGTTGTGTGCAGAGTGTTCAAGAAGAGAATGACAACAGTGAGAAAAGTAGGAGAATATGAATCACCATGTTGGTACGACGAAGCAGCCTCCTTCATGCAAGAACTTGATCATCATTCTCCTTCAAGTCGTATTAATAATCATCATAATCACATTTCTCCATCACCTTACTATGCATGCAAGCAAGAGTTTGAATTCCAATACAACATGAACAATCTCCCTCATCACGATCCTTTCCTCCAACTTCCTCAGCTTGAAAGCCCTAATCATCATAAACTTCCCACCACCACCGTCTTCACTAGTAACAGTACCACATTTGATCATCACCATCATCACAGAAACACCACTAGTATGACTTCGTTTTATGATCAGCCAGTTGTTGTGGATGATGATCAAGTGGTTACTGATTGGAGGGTGCTTGATAAATTTGTTGCTTCTCAGCTCAGTCAAGATCTTCATCACCAACATGCTTCCAAGGAAACCATTAATAATGCTGACGTTGTTGCTGATGTCACTACTGAACAAGTTACTTCTATGATGGAGAATCAGTCAACGAGGTCAACGTCCGAGTTGGAGCAGGAATATGCATCAGCATCCACCACCACCACCTGCAATATTGAACTATGGAAGTGA 1074 0.4153 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCRIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTVRKVGEYESPCWYDEAASFMQELDHHSPSSRINNHHNHISPSPYYACKQEFEFQYNMNNLPHHDPFLQLPQLESPNHHKLPTTTVFTSNSTTFDHHHHHRNTTSMTSFYDQPVVVDDDQVVTDWRVLDKFVASQLSQDLHHQHASKETINNADVVADVTTEQVTSMMENQSTRSTSELEQEYASASTTTTCNIELWK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0478 357 MobiDBLite consensus disorder prediction 327 349 - -
Mibi10g0478 357 FunFam NAC domain-containing protein 16 160 - -
Mibi10g0478 357 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Mibi10g0478 357 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Mibi10g0478 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 276 - -
Mibi10g0478 357 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Mibi10g0478 357 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0478 Mibi-ChrMibi10 8788057 8790837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0478 1 355 NAC Transcription Factor Family AT1G62700 55.388 2.33e-138 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi10g0478 NAM 4.3e-38 No_clan