Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0473 ATGGATCTGAAGTCTTCTCATGCATCTCCTGTTCTTACTGATCCTGTTCCAATAAACAAGTCAAGACTAGGAATGGGAATGCATTCTGGTCTCATAAGTTACTCCCAGCAAGATTCTTCATCTCTCTCATCATCACACTCTCCTCTTAAGTATTCAAGAAATAATAGTTCAAGGAAGAGTTCAGGAAATCTTGATGATGTTCGCTCCAATGGCTGGCTCGATGCCATGAAAGCTTCTTCTCCTCCCCGGAAGAAGCAGCCCATCAGAGGCTTCAACTCTCACATCGATACTGAAGACAACTATAGCTCTTGGTTGGTGGATTATCCATCAGCACTGGAGAGTTTTGAGGACATGATTAAGCATGCGAAGGATAAGAAGATTGCAATGTTCTTAGATTATGACGGCACTCTTTCACCCATAGTGGATGATCCAGATTGTGCATTCATGTCTGAAGATATGCGTAGTGTAGTGAGGAATGTTGCAAAGTGTTTCCCTACGGCAATCATCAGTGGGAGAAGCCGAGACAAGGTTTTTGATTTAGTTAAACTAACGGAACTGTACTATGCTGGTAGTCATGGGATGGACATTATTGGGCCTGCTTGTCAAACTCTGTCTAATAGCCATCCACACTGTGTCAAGTCTACCGACCAACAGGGAAAGGAGATAACTCTATTTCAACCTGCTAGAGAATTCCTGCCTCTTATTGATGAGGTCTTTAATAGGCTTGTGGAGATCACTAAAGATATACAAGGTGCAAAAGTTGAACACCACAAGTTTTGTGTTTCAGTACATTATCGTAATGTAGAAGAAAACAATTGGACAGTTATTGGACAACTTGTGCATGACTTGTTAAAAGATTACCCTCTCTTACGATCAAGACATGGACGTAAGGTTTTAGACATTCGTCCTGTGATCGAATGGAACAAAGGAAAAGCAGTTGAATTTTTACTTGAGTGTCTCGGGTTAAGTGAAGGGAAAGATGACGTGCTTGCCATCTACATAGGAGATGATAAGACCGATGAAGATGCTTTCAAGGTGCTGAGAGAGAGAGCAGGAGGTTATGGGATTTTAGTTTCGTCGTCAAGGAAACAAAGCAATGCCTTCTATTCTCTCCGGGACCCATCTGAGGTCATGAAATTTCTGGAAATGTTGGTGAATTGGAAGAGGGAAGAAGAAAGCAAACATCAAAGGAAGATGCATTCACTTGAATAA 1212 0.4167 MDLKSSHASPVLTDPVPINKSRLGMGMHSGLISYSQQDSSSLSSSHSPLKYSRNNSSRKSSGNLDDVRSNGWLDAMKASSPPRKKQPIRGFNSHIDTEDNYSSWLVDYPSALESFEDMIKHAKDKKIAMFLDYDGTLSPIVDDPDCAFMSEDMRSVVRNVAKCFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPACQTLSNSHPHCVKSTDQQGKEITLFQPAREFLPLIDEVFNRLVEITKDIQGAKVEHHKFCVSVHYRNVEENNWTVIGQLVHDLLKDYPLLRSRHGRKVLDIRPVIEWNKGKAVEFLLECLGLSEGKDDVLAIYIGDDKTDEDAFKVLRERAGGYGILVSSSRKQSNAFYSLRDPSEVMKFLEMLVNWKREEESKHQRKMHSLE 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0473 403 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 129 350 IPR006379 -
Mibi10g0473 403 Gene3D - 231 401 IPR023214 -
Mibi10g0473 403 Gene3D - 127 215 IPR023214 -
Mibi10g0473 403 MobiDBLite consensus disorder prediction 34 69 - -
Mibi10g0473 403 SUPERFAMILY HAD-like 128 388 IPR036412 -
Mibi10g0473 403 TIGRFAM T6PP: trehalose-phosphatase 125 385 IPR003337 GO:0003824|GO:0005992
Mibi10g0473 403 Pfam Trehalose-phosphatase 130 375 IPR003337 GO:0003824|GO:0005992
Mibi10g0473 403 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 50 397 IPR044651 GO:0004805|GO:0005992
Mibi10g0473 403 FunFam Trehalose 6-phosphate phosphatase 234 394 - -
Mibi10g0473 403 MobiDBLite consensus disorder prediction 1 20 - -
Mibi10g0473 403 MobiDBLite consensus disorder prediction 34 67 - -
Mibi10g0473 403 CDD HAD_TPP 128 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0473 Mibi-ChrMibi10 8579040 8584173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0473 121 384 Trehalose Biosynthesis Gene Families AT1G70290 25.267 7.80e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0473 10 8579040 8584173 Mibi10g0473 10 8579040 8584173 ECH