Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0449 ATGGTGAAGATAGCTTTTGGTAGCTTGAGTGACTCTTTCAGCGCCGCTTCCATTAAGGCTTATGTGGCAGAGTTCATTGCCACTTTGCTTTTCGTCTTCGCCGGTGTCGGATCAGCCATAGCTTATGGTGCCCTTACAAAGGATGCGCCATTGGACCCGGCGGGGCTAGTAGCGGTGGCGGTGGCGCATGCATTTGCGCTGTTCGTCGGAGTGTCGGTGGCGGCCAACATCTCCGGTGGCCATTTGAATCCAGCTGTCACATTTGGATTGGTCATTGGAGGCAACATCACAGTCTTGACTGCTATCTTTTATTGGATTTTCCAATTGTTGGGATCCTTGGTTGCTTGCCTTCTCCTCAAATTTGTCACAAGTGCCCCGACCATTCCAGTCCATGGACTTGCTTCAGGAGTGGGAATTTTTGAAGGCATAGTGTTTGAAATTGTTGCCACTTTTGGACTTGTTTACACTGTGTATGCCACAGCAGCTGACCCCAAAAAGGGCTCATTGGGCATTATTGCACCCATTGCAATTGGTTTTATTGTTGGTGCCAACATCTTGGCCGCCGGCCCATTCAGTGGCGGTTCAATGAACCCGGCCCGTTCATTCGGCCCAGCCGCCGTATCTGGCGACTTCACCAACTATTGGATCTACTGGGTCGGCCCATTGATCGGCGGCGGTTTGGCCGGTTTGATCTATGGTGACGTCTTCATAGGCTCATATGCCCCAGTTCCTGCCTCTGAAAACTACCCTTGA 753 0.5139 MVKIAFGSLSDSFSAASIKAYVAEFIATLLFVFAGVGSAIAYGALTKDAPLDPAGLVAVAVAHAFALFVGVSVAANISGGHLNPAVTFGLVIGGNITVLTAIFYWIFQLLGSLVACLLLKFVTSAPTIPVHGLASGVGIFEGIVFEIVATFGLVYTVYATAADPKKGSLGIIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAAVSGDFTNYWIYWVGPLIGGGLAGLIYGDVFIGSYAPVPASENYP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0449 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Mibi10g0449 250 FunFam Probable aquaporin TIP1-1 2 248 - -
Mibi10g0449 250 Gene3D Glycerol uptake facilitator protein. 2 241 IPR023271 -
Mibi10g0449 250 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 CDD MIP 19 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi10g0449 250 PANTHER AQUAPORIN-8 4 238 IPR034294 -
Mibi10g0449 250 SUPERFAMILY Aquaporin-like 16 238 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0449 Mibi-ChrMibi10 7625235 7627408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0449 1 247 Major Intrinsic Protein MIP AT5G47450 76.518 1.09e-133 375