Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0437 ATGGCTTCTCTTTTGCCTCTCTTCTTCATCTCTCTGCAACTTCTCTTGGCTCACACTTCCTTATTGTTGCATGCACTGTCTACAACAACCACATCAAGCCGGGCGGTGGGGCCCACCGGTCGCCGTGTAATCGCCGTCGACATCAACGGAGGTGGCTATTTCCGGTCTGTCCAAGCCGCCGTGGATGATGTCCCAGACAACAATAGAGTGAATGTACTAATTCAAATCAGCGCCGGATACTACATAGAGAAAGTGGTGGTGCCGGTGACGAAGCCGTACATAACGTTTCAGGGAGAGGGGAGGGAGAAAACAGTGATAGAATGGCATGATCGAGCCGCCGATATGGGCCCCAATGGACAACAATTAAGAACTTACAGAACTGCTTCTGTCACAGTTTTTGCCAACTTTTTCTCTGCTAGGAACATCAGCTTCAAGAACACGGCGCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAAGCGGCATCGTTTAGGATATCAGGGGATAAAGCGTACATGTTGGGATGTGGGTTCTATGGAGCACAAGACACTCTTTGTGATGACTTTGGACGACACTACTTCAAAGATTGTTATGTGGAAGGCTCCATTGATTTCATCTTTGGCAATGGCAGGTCCATCTACAAGGATTGCGAGCTGCACTCAATAGCAACGAGGTTCGGGTCAATAGCAGCCCAAGATCGAAAAAGCCCTAATGAGAAGACTGGATTTGCATTCATAGGATGCAGAGTAACAGGTAGTGGGCCCATATATGTGGGCCGAGCAATGGGCCCATATTCAAGAATCGTCTTTGCTTACACTTATTTCGATGACATTGTAGCTCATTCTGGTTGGGATAATTGGAATCACGACCTAAGCAAAAACAAGACAATATTCTTCGGAGTGTACAAGTGCTGGGGCCCAGGAGCCACGTCATTGAGGGGGATATCATGGGCCCCAGAGCTAGATTTTAAGTTGGCACATCCATTTCTAGCCAAGAGCTTCGTCAATGGAAGACATTGGCTACCATTCTTTGATGCTTCTTAG 1041 0.4851 MASLLPLFFISLQLLLAHTSLLLHALSTTTTSSRAVGPTGRRVIAVDINGGGYFRSVQAAVDDVPDNNRVNVLIQISAGYYIEKVVVPVTKPYITFQGEGREKTVIEWHDRAADMGPNGQQLRTYRTASVTVFANFFSARNISFKNTAPAPMPGMEGWQAASFRISGDKAYMLGCGFYGAQDTLCDDFGRHYFKDCYVEGSIDFIFGNGRSIYKDCELHSIATRFGSIAAQDRKSPNEKTGFAFIGCRVTGSGPIYVGRAMGPYSRIVFAYTYFDDIVAHSGWDNWNHDLSKNKTIFFGVYKCWGPGATSLRGISWAPELDFKLAHPFLAKSFVNGRHWLPFFDAS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0437 346 Gene3D - 39 344 IPR012334 -
Mibi10g0437 346 ProSitePatterns Pectinesterase signature 2. 198 207 IPR033131 -
Mibi10g0437 346 Pfam Pectinesterase 45 336 IPR000070 GO:0030599|GO:0042545
Mibi10g0437 346 FunFam Pectinesterase 39 342 - -
Mibi10g0437 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 340 - -
Mibi10g0437 346 SUPERFAMILY Pectin lyase-like 41 342 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0437 Mibi-ChrMibi10 7436685 7439245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0437 3 345 Carbohydrate Esterase AT5G47500 66.573 7.13e-180 501