Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0421 ATGGCCCCAAAAAGTCAGACTGAGTCACCCATTAGGAAATTCATTAACAGAGGAGCTTGGACTCCCGAGGAAGATCGAAAGCTTGCTCAGTGCATTGAACTTCATGGAGCTAAGAGGTGGAAAACCATTGCTCTTAAATCAGGTTTAAACAGATGTGGCAAGAGTTGCAGGCTGAGATGGCTCAATTATCTTAGGCCAAACATCAAGAGAGGCAACATTTCACTTGAAGAAGAAGATTTAATTCTTAGGCTTCACAAACTCCTTGGAAATAGGTGGTCGTTAATAGCTGGAAGACTTCCAGGACGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGTGCAAAAAAGTTAATCTTGAAGAGAAGAAAAAGAAGCCAAACACTTCAACTCCACAAGAAAGCACACCCCAAAATACTTGGGATAGTGCTATTGTGGAGAATGAGGAAGCCATTAATAGAAATGGAGCAGGGAACTCAGAAGGCAGCTTTGATGTGAATGAATTCCTTGACTTCTCTACCAAAGAAGGATCTTTTCATGAGTTGGATTGGATAAACAAGTATTTAGAACTAGATGAATTTCCAGGGAGCAATGGGGAATTTTGA 609 0.399 MAPKSQTESPIRKFINRGAWTPEEDRKLAQCIELHGAKRWKTIALKSGLNRCGKSCRLRWLNYLRPNIKRGNISLEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVNLEEKKKKPNTSTPQESTPQNTWDSAIVENEEAINRNGAGNSEGSFDVNEFLDFSTKEGSFHELDWINKYLELDEFPGSNGEF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0421 202 CDD SANT 19 64 IPR001005 -
Mibi10g0421 202 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 14 143 - -
Mibi10g0421 202 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Mibi10g0421 202 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Mibi10g0421 202 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Mibi10g0421 202 Gene3D - 73 145 - -
Mibi10g0421 202 SUPERFAMILY Homeodomain-like 16 111 IPR009057 -
Mibi10g0421 202 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Mibi10g0421 202 MobiDBLite consensus disorder prediction 122 142 - -
Mibi10g0421 202 FunFam MYB-related transcription factor 16 69 - -
Mibi10g0421 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Mibi10g0421 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Mibi10g0421 202 Gene3D - 17 69 - -
Mibi10g0421 202 CDD SANT 74 115 IPR001005 -
Mibi10g0421 202 SMART sant 16 66 IPR001005 -
Mibi10g0421 202 SMART sant 69 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0421 Mibi-ChrMibi10 7094045 7095171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0421 17 167 MYB Transcription Factor Family AT5G40330 51.656 6.82e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi10g0421 Myb_DNA-binding 3.4e-18 CL0123