Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0420 ATGGAAGCAGAACAACAACAACAACCACAACCTCTCCTTAACACTTTACCTCAACCAACCACTCCTTCTTCCTCCTCCTCCTCCTCCTCGTGCGCCGTCACAGAAGCCATTAATGCAGATCATGAAGCTCAAAAAGAAGAGAAGGTGAGGAAGAAGAAGAATAATAATAATACCTATAAGAAGAACATAAACGACATGGAAGGGAAGCATCCAACTTACAGAGGAGTACGTATGCGACAATGGGGGAAATGGGTTTCAGAAATCAGAGAACCAAAAAAGAAATCCAGAATATGGCTAGGAACTTTTTCCACGGCAGAAATGGCGGCTCGAGCCCATGACGTCGCCGCCCTCACCATCAAAGGCACCTCCGCCTTCCTCAACTTCCCGGAGTTAGCCGGCGTCCTCCCTCGTCCGGCCAGTAATTCCCCCAAGGACATCCAGGCCGCAGCCTCCAAGGCAGCCGCCCTCAATTGCCATATGGACATGCATCGACCCGAGCCTGACTCTGATACCATCCAAGCTGACAACGGTGAAGGGACTCCCCCGCTGTCATGCTCGCCGTCCACGAAGGATGACAGCGATGACACCTTCCATAACCTCCCCGATATCGTGAATAGTAGTGGCGCCGTTGCCGGCGAGTTTCATTACTCCTCGCTGTGGCTCCTAGCTGGCGCGGATTATAAAGACTCAGGTTTCCGACTCGAAGAGCCAATTACGTGGGATTAG 726 0.5179 MEAEQQQQPQPLLNTLPQPTTPSSSSSSSSCAVTEAINADHEAQKEEKVRKKKNNNNTYKKNINDMEGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALTIKGTSAFLNFPELAGVLPRPASNSPKDIQAAASKAAALNCHMDMHRPEPDSDTIQADNGEGTPPLSCSPSTKDDSDDTFHNLPDIVNSSGAVAGEFHYSSLWLLAGADYKDSGFRLEEPITWD 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0420 241 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mibi10g0420 241 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Mibi10g0420 241 MobiDBLite consensus disorder prediction 1 35 - -
Mibi10g0420 241 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Mibi10g0420 241 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Mibi10g0420 241 MobiDBLite consensus disorder prediction 173 190 - -
Mibi10g0420 241 MobiDBLite consensus disorder prediction 162 199 - -
Mibi10g0420 241 Coils Coil 42 69 - -
Mibi10g0420 241 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
Mibi10g0420 241 Gene3D AP2/ERF domain 72 130 IPR036955 GO:0003700|GO:0006355
Mibi10g0420 241 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Mibi10g0420 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 48 206 - -
Mibi10g0420 241 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Mibi10g0420 241 MobiDBLite consensus disorder prediction 1 70 - -
Mibi10g0420 241 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Mibi10g0420 241 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0420 Mibi-ChrMibi10 6886986 6887711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0420 69 238 AP2-EREBP Transcription Factor Family AT2G44940 49.000 4.90e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0420 AP2 8.4e-13 CL0081