Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0401 ATGGCAAACTCTGCTGAATTATCAGCTCTGGATCGTATAAAATTGCATCTTCTTGGTGAACTCTCTCCTGTTGCCACTTTCTCCAGTGGCCTTATCAGTTCAAACACAGCAATTTCCAGCTCTGAATCTCACTCTATATGTACCCAATCATCGAATTCTGACTCTCCCATCACTGTTTCTAATTACCTTCCTGAAATCTTCGAATTCCCATCCATCTCCACAAATCTATCTGAGTTCGATTTCAACAACCAGGTCATCGACCTCTCAACCCCCAAATTCCAAACCAAAACTCCACAATTCCAAGAAAACTCACAGTACAACAATCCCATGTTCGAGTTTCAGAACAAATCTCAATCAAATCGGAAACCATCGTTGCAAATCACGCTTCCCAAGAAAACCGAGTGGATCCAATTCGGAAATCCAGATCAACAACGACAACAAGAAGAAGTATCAAAAGTGTCCGTGCAGACTAATTCAACCATTGAAGAGAAAAGACATTACAGAGGAGTACGACAGAGACCATGGGGAAAATTCGCCGCCGAGATTCGAGATCCAAACAAGCGTGGATCTAGGGTTTGGCTTGGAACTTTCGACACTGCGATTGACGCAGCAAAAGCATACGATAGAGCCGCGTTTAAGCTTCGAGGATCAAAAGCGATCCTCAATTTCCCTCTGGAGGTAGAAACCTCCGGCACGGCGGAGAGAAAACGCCGGCGAGGAGATGATGACGTGGATGTGAAACCAGTGGTGAAAAAAGAGAAGAAGATGATGGAATCTGATGAGGTGGGAAGGATAAGGGAAATGCCTTTAACGCCGTCAATGTGGACGGGGTTGTTGGAGAATGATTTGAAGGACATTTTCACGGTCCCGCCGTTATCTCCGTTATCTCCTCACCCTCCTATGGGGTTTCCTCAGCTTATGGTTGTATGA 930 0.4516 MANSAELSALDRIKLHLLGELSPVATFSSGLISSNTAISSSESHSICTQSSNSDSPITVSNYLPEIFEFPSISTNLSEFDFNNQVIDLSTPKFQTKTPQFQENSQYNNPMFEFQNKSQSNRKPSLQITLPKKTEWIQFGNPDQQRQQEEVSKVSVQTNSTIEEKRHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIDAAKAYDRAAFKLRGSKAILNFPLEVETSGTAERKRRRGDDDVDVKPVVKKEKKMMESDEVGRIREMPLTPSMWTGLLENDLKDIFTVPPLSPLSPHPPMGFPQLMVV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0401 309 FunFam Ethylene-responsive transcription factor 2 165 226 - -
Mibi10g0401 309 CDD AP2 166 224 IPR001471 GO:0003700|GO:0006355
Mibi10g0401 309 PANTHER DNA-BINDING DOMAIN 116 237 IPR044808 GO:0003700|GO:0009873
Mibi10g0401 309 ProSiteProfiles AP2/ERF domain profile. 166 224 IPR001471 GO:0003700|GO:0006355
Mibi10g0401 309 Gene3D AP2/ERF domain 165 226 IPR036955 GO:0003700|GO:0006355
Mibi10g0401 309 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Mibi10g0401 309 PRINTS Ethylene responsive element binding protein signature 206 226 IPR001471 GO:0003700|GO:0006355
Mibi10g0401 309 SMART rav1_2 166 230 IPR001471 GO:0003700|GO:0006355
Mibi10g0401 309 Pfam AP2 domain 166 216 IPR001471 GO:0003700|GO:0006355
Mibi10g0401 309 SUPERFAMILY DNA-binding domain 166 226 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0401 Mibi-ChrMibi10 6408647 6409576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0401 1 309 AP2-EREBP Transcription Factor Family AT5G47230 49.688 1.33e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0401 AP2 2.6e-15 CL0081