Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0397 ATGGCAAACTGTGCTGAATTATCAGCTCTGGATCGTATAAAATTGCATCTTCTAGGTGAACTCTCTCCTGTTGCCACTTTCTCCAGTGGCCTTATCAGTTCAAACAGAGCAATTTCCAGCTATGAATCTGACTCTATATGTACCCAATCATCGAATTCTGACTCTTCCATCACTGTTTCCGATTACCTCCCTGAAATCTTCGAATTCCCATCCATCTCCACCAATCTATTTGACTTCGAGTTCCAAAACCAAGTCATTGACCTCTCAACCCCCAAATTCCAAACCCAAACTCCACAATTCGATGAAGATAACTCACAGTCCACCAATTCCATGTTCGAGTATCAAAACAGATCTCAATCAAATCGGAAACCATCGTTACAAATCACGCTTCCCAAGAAAACCGAGTGGATCCAATTCGGAAATCCAGATCAACAACAACAACAAGAAGAAGTATCAAAAGTGTCCGTGCAGACTAATTCAACCATTGAAGAGAAAAGACATTACAGAGGAGTACGACAGAGACCATGGGGAAAATTCGCCGCTGAGATTCGAGATCCAAACAAGCGTGGATCTAGGGTTTGGCTTGGAACTTTCGACACTGCGATTGAAGCAGCAAAAGCATACGATAGAGCAGCGTTTAAGCTTCGAGGATCAAAAGCGATACTCAATTTCCCTCTGGAGGTAGAAACCTCCGGCACGGCGGAGAGAAAACGCCGGCGAGGAGATGATGACGTGGCGGCTCAAATGGAGGAAGTGAAACCAGTGGTGAAAAAAGAGAAGATGATGGAATGTGATGAGCTGGGGCGGATAAGGGATATGCCGTTAACGCCGTCAATGTGGACGGGGTTCTTGGACAATGATTTGAAGGATGTTTTCATGGTGCCGCCGTTATCTCCGTTATCCCCTCATCCTCCTATGGGGTTTCCTCAGCTCATGATGGTTGTATGA 948 0.4525 MANCAELSALDRIKLHLLGELSPVATFSSGLISSNRAISSYESDSICTQSSNSDSSITVSDYLPEIFEFPSISTNLFDFEFQNQVIDLSTPKFQTQTPQFDEDNSQSTNSMFEYQNRSQSNRKPSLQITLPKKTEWIQFGNPDQQQQQEEVSKVSVQTNSTIEEKRHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEVETSGTAERKRRRGDDDVAAQMEEVKPVVKKEKMMECDELGRIRDMPLTPSMWTGFLDNDLKDVFMVPPLSPLSPHPPMGFPQLMMVV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0397 315 PRINTS Ethylene responsive element binding protein signature 168 179 IPR001471 GO:0003700|GO:0006355
Mibi10g0397 315 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Mibi10g0397 315 SUPERFAMILY DNA-binding domain 167 227 IPR016177 GO:0003677
Mibi10g0397 315 FunFam Ethylene-responsive transcription factor 2 166 227 - -
Mibi10g0397 315 Pfam AP2 domain 167 217 IPR001471 GO:0003700|GO:0006355
Mibi10g0397 315 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Mibi10g0397 315 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Mibi10g0397 315 CDD AP2 167 225 IPR001471 GO:0003700|GO:0006355
Mibi10g0397 315 PANTHER DNA-BINDING DOMAIN 115 238 IPR044808 GO:0003700|GO:0009873
Mibi10g0397 315 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0397 Mibi-ChrMibi10 6384637 6385584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0397 1 314 AP2-EREBP Transcription Factor Family AT5G47230 46.462 1.19e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0397 AP2 5.2e-16 CL0081