Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0396 ATGTACGGACAGGAAGCTTTCGGGTCGGATTTAGCCTTATTGGAGTCAATTCGACTTCACTTGCTCGGAGACTACGACCCCACTTTCACAGAATCAGATAATTCTTCTTCTTCATCAGGACCCGACCCGATTTACAAACGGAGCTCCAGTTTCAGCAGCTTGTACCCATGTTTAACTGATAATTGGGGCGAATTGCCTCTCAAGGAAGATGATTCAGAAGACATGTTCCTCTACGGCGTCCTCCGTGACGCCGTCCACTTCGGGTGGGTCCCATCCCTCGATGTCGGATCGCCGGAGAGCATATCATCGGATTTCACCCCGACCGTTAAATCGGAGCCGGATCTCTTACCGGTTTTGGATTCTCCGGCGGGTCCGCCGCCGCCGCCGGCGGTGAAGGAGGAGGCTCATGCGGCGGAGGTGGCGGCGCCGGCGGTGGTGCCTTCGAAGGGGAAGCATTACCGAGGGGTGAGGCAGAGGCCGTGGGGGAAGTTCGCGGCGGAGATTAGGGATCCGGCGAAGAACGGGGCTAGGGTTTGGCTCGGGACGTTCGAGACGGCGGAGGACGCGGCGTTGGCCTATGATAGGGCGGCGTATAGGATGAGGGGGTCGCGGGCGTTGTTGAATTTTCCGTTGCGGGTGAATTCGGGCGAGCCCGACCCGGTCCGGGTGACGTCGAAGCGATCGTCGCCGGAGAGGTCGTCGGCGCCGGAGAAGAGGAGGAAGAAGGAGGGAGGGGTTGTGGTTATGGTGGGGACAGGATCAAGTGTGACAGGGCAAGTGGGAAGCCAAGTTGGAACCACGTCGTTATTAGTGAGCTAA 819 0.5873 MYGQEAFGSDLALLESIRLHLLGDYDPTFTESDNSSSSSGPDPIYKRSSSFSSLYPCLTDNWGELPLKEDDSEDMFLYGVLRDAVHFGWVPSLDVGSPESISSDFTPTVKSEPDLLPVLDSPAGPPPPPAVKEEAHAAEVAAPAVVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPERSSAPEKRRKKEGGVVVMVGTGSSVTGQVGSQVGTTSLLVS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0396 272 MobiDBLite consensus disorder prediction 215 246 - -
Mibi10g0396 272 SUPERFAMILY DNA-binding domain 152 212 IPR016177 GO:0003677
Mibi10g0396 272 PANTHER DNA-BINDING DOMAIN 136 233 IPR044808 GO:0003700|GO:0009873
Mibi10g0396 272 MobiDBLite consensus disorder prediction 231 245 - -
Mibi10g0396 272 ProSiteProfiles AP2/ERF domain profile. 152 210 IPR001471 GO:0003700|GO:0006355
Mibi10g0396 272 CDD AP2 151 210 IPR001471 GO:0003700|GO:0006355
Mibi10g0396 272 SMART rav1_2 152 216 IPR001471 GO:0003700|GO:0006355
Mibi10g0396 272 MobiDBLite consensus disorder prediction 112 136 - -
Mibi10g0396 272 FunFam Ethylene-responsive transcription factor 2 151 211 - -
Mibi10g0396 272 Gene3D AP2/ERF domain 151 213 IPR036955 GO:0003700|GO:0006355
Mibi10g0396 272 Pfam AP2 domain 152 202 IPR001471 GO:0003700|GO:0006355
Mibi10g0396 272 PRINTS Ethylene responsive element binding protein signature 176 192 IPR001471 GO:0003700|GO:0006355
Mibi10g0396 272 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0396 Mibi-ChrMibi10 6363889 6364707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0396 9 245 AP2-EREBP Transcription Factor Family AT4G17500 58.704 2.71e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi10g0396 AP2 1.1e-14 CL0081