Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0392 ATGGCCCAAACTCTTAGGAAGAAAAGACAGATAATGAATTATGCCGACTCAGGCAGTCCTGAGATAGATTCTGATACTTCTGATTCGGATTATTTGTCAAGGAGCTGTAGTAGACAAAGAAAGAGAAGGAACTTGACATTGTGCTCTGCAACTACAAAGGAGACTAAAACGGCAAACTCAAGTGTAAATTTAACTGCAAGGCGTCGACGAGGTCGTCCCTCAAAGAAGAGGGCACAGGAAGTACAAAACAAGGAAGCCTGTGATGCTAAAAGTTCAAACAAGAAAAGTGGAACAACATGTGCTGACCAACCAAGTTCAAACACAATAACCATTTTATCATGGTTGATAGATTGTAATGTAATCAAGGAAGGTGAACATGTTGTCTACTCGGATGATATAAAGGAAAGTCCAGCTAAGAGAGGAGAAATTGTCAGAGGTAGGATTCTCTGCAGCTGTTGCCAGAAGGAATATTCTGTGTGGGCCTTTGAGAAACATTGTGGAAGGGATCTTAAACAACCCTATGAACATATTTACCTCCTTGAAAAACGAACATTTCTTCTGGAGTCAATAAAGATTGCTTGCCATGAGGACAGTGAACGGAAACACCAGGAAACACATTCCTTTAAACGCACAAGAAATTTGAAAGATAAACATGATTATGCTTGTCCTATTTGCGGAGATGGGGGAGACTTGATCTGCTGTGACAAGTGCCTCGCCACATATCATTTGAACTGTTTGTATTTGGAGAAGCTCCCTCAAGGTGATTGGTTCTGTCCTTATTGTGTATGCAAGCATTGTGGGCTTGGTGATAAAAGCAAGCAATTGATTGCATGCTTCCAATGTAACAAAAAATTTGAATGGGGATGCTTCAAGGAATTTGAGAAAGAAGCTCTTAAAGAGGCCTTAGACTCTGACTGTTTGCGTTTATATTGTAGGCAAAGTTGTAGAAAGGCCTACGAGAAATTGGAGTCTTTAGTTGGAGTCCGGAATGAAATCATGGAAAGCTACTCTTGGAGAGTTATTCATCAAATGGATAGGATTTCAACTGTCTCTGAACACCAACGTTTGGAGAATAATGCCAAGGTTGCGATTACGAGGAAATTTATGGATGAAGCTTTTGAGCCAATAGTTGACAGATACTCAGGCCTCAATGTGGTTCAAAGTGTACTATACAGTATGGGGTCAAAGTTACCAAGGATTGATCATAGCCGTTTCTATACATTTATACTAGAAAAAGATGACGAGGTTGTCTCTGCTGCTTCTGTGAGAATCCATGGGCAGAGGCTTGCCGAAATGCCATTTATGGCCACACACAAAAATCATCGAAGAAAAGGATACGGTGGACAAATTTTGGGAGTGGTGGAAACGGTCCTCAGCCATCTTAATATCCAAAATCTAATAATCCCTTCTATTCCGGATCGGGTCAGCATGTGGAGGGATAAGTTTGGATTCGGCGAACTGCCAATAGAATTGAAAAGGGAAAGCACCTCGTATAATATTTTGATGTTCTTCGAATCTGTACTGCTGTGCAAACCCTTAACTACACCGACAGCAGAATCTGATGATTGTGACCGATCCCTTCTAGACCTCAACAAACCCCCTCCTGAAGAAAACATGAGGGCTGAGGAAGATAATGCCTCATAA 1644 0.4124 MAQTLRKKRQIMNYADSGSPEIDSDTSDSDYLSRSCSRQRKRRNLTLCSATTKETKTANSSVNLTARRRRGRPSKKRAQEVQNKEACDAKSSNKKSGTTCADQPSSNTITILSWLIDCNVIKEGEHVVYSDDIKESPAKRGEIVRGRILCSCCQKEYSVWAFEKHCGRDLKQPYEHIYLLEKRTFLLESIKIACHEDSERKHQETHSFKRTRNLKDKHDYACPICGDGGDLICCDKCLATYHLNCLYLEKLPQGDWFCPYCVCKHCGLGDKSKQLIACFQCNKKFEWGCFKEFEKEALKEALDSDCLRLYCRQSCRKAYEKLESLVGVRNEIMESYSWRVIHQMDRISTVSEHQRLENNAKVAITRKFMDEAFEPIVDRYSGLNVVQSVLYSMGSKLPRIDHSRFYTFILEKDDEVVSAASVRIHGQRLAEMPFMATHKNHRRKGYGGQILGVVETVLSHLNIQNLIIPSIPDRVSMWRDKFGFGELPIELKRESTSYNILMFFESVLLCKPLTTPTAESDDCDRSLLDLNKPPPEENMRAEEDNAS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0392 547 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 401 484 IPR016181 -
Mibi10g0392 547 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 363 514 IPR000182 GO:0016747
Mibi10g0392 547 MobiDBLite consensus disorder prediction 51 67 - -
Mibi10g0392 547 PANTHER PHD FINGER PROTEIN 12 48 539 IPR042163 GO:0003714|GO:0045892
Mibi10g0392 547 CDD NAT_SF 408 468 - -
Mibi10g0392 547 Pfam Tify domain binding domain 141 181 IPR032308 -
Mibi10g0392 547 Gene3D - 328 502 - -
Mibi10g0392 547 MobiDBLite consensus disorder prediction 76 91 - -
Mibi10g0392 547 MobiDBLite consensus disorder prediction 17 33 - -
Mibi10g0392 547 MobiDBLite consensus disorder prediction 12 37 - -
Mibi10g0392 547 ProSiteProfiles Zinc finger PHD-type profile. 219 264 IPR019787 -
Mibi10g0392 547 MobiDBLite consensus disorder prediction 51 104 - -
Mibi10g0392 547 MobiDBLite consensus disorder prediction 522 547 - -
Mibi10g0392 547 SMART PHD_3 221 262 IPR001965 -
Mibi10g0392 547 SUPERFAMILY FYVE/PHD zinc finger 215 267 IPR011011 -
Mibi10g0392 547 MobiDBLite consensus disorder prediction 516 547 - -
Mibi10g0392 547 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 308 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0392 Mibi-ChrMibi10 6334080 6337225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0392 91 521 PHD Transcription Factor Family AT1G05380 37.723 6.63e-90 297