Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0384 ATGGGATCTCTCATCGCCGGCCACACTCTCGACGCTTCAACATCCTCCGATTCCGAAATCGCCTGGCACTTTGCTTCCCTTCTTCTCTCACTCGGCCATCCACTTCATCCCGCCGATCTCGCTTCTCGATGCACTCTTTTCACTGCTTCTCCTCAGCTAGTTGAGTTCCTCTGCTCGATCCCTCAATCTCCTATCTTGTTGACCTCCGATTTCTATGTCACTCTCTCCGCTGTTGCTATACTTGCCGTTGGACGATTCGTCTCGGTAACGGATTGTTTTGGTGGTTCTTTTGTACCTAGATTTGGATTTAGGGTTTCCTCGTTGGATGTTTGGGGGAATAGGTGTGGGAAACGGAAACGGAGGTTTATTTTGGACTCTGATTTTCTTCCTGTGGCTAAAAGAGGGATTACTTTTTGTTCTGAGCATGTAAATGAGTTGGATCCAATTAAGATGCTTCCTCCGTGCGACGATTCTTCTAGGATTATGTTACATTCGCATGGCAATTTAAGCACTGAAATGTTTGGAAGTCCAGATGAGTGCAAGGAAGTTCAAATTGAGGAGACTTCAGGAAGTAGGACTAATGTCAATGACGTAGTAAAAGATCTTAAATCTACCAATATGCCTACGCTGGTCGATGATAGGATTAATGACAATAAAGTAGCTTCAAACGTTAGAATGGGTGATGATAGCATGAAACCTCTTCCGAACATAGTACAGCCATTAAATGATACTGTTCTAGAAATGCCGCCCAAAGATGATACTGGAAGGATTCATGATGAAAGTTGTAATTATGTAAACCATTTGAATGGAAAGTCAATGGCTGCAGATACGGAAAGTATGGACTTACCTACGGATTCCCTTTCTTTGCAAAAGTTTCGTCAATCCTCCCTGAACACGAATGTCATACCCAGTGATGCAAATGTTCCTAATACGCAAAACATGTCCAGAAATTTACATAATGAAGAGAAACGGAACTTTAGTAGGGGTCAGGCATCAACGAGTAAGGGACAGAAGAAGAATTGCACTGCCATGTATTTCAAGGAAAAAAGGGGAACTTCGACCTCAGCGTGTCCTGAGGATCAAAAGGAGCGTAAAGACCTTCCAGCATTTGAATCGTACATTGTAGAGGAGGAAGTAGGCTCAGGTGCTTATGGCATTGTTTACAAAGCAAGGAGGAAGAATAATGGAGCCACGGTTGCCATTAAATGCCCTCATGCTAAAGCTCACGGGCAATATGTTATTAATGAGCTGAAAGTGCTGGAGCGATTTGGAGGCAAAAACTTTATCATTAAATATGAAGGCAGCATCAAGAATGGAAATACTGATTGCTTTGTTCTAGAACATATTGAGCACGACAGGCCCGAGGTGTTAAAGAGAGAAATTGATATTGTTCAACTCCGATGGTATGGTTACTGCATGTTCAGGTCTCTTGCAGCTCTTCACAAGAGGGGAATAATACACAGAGATGTTAAACCCGGAAACTTCCTTTTCTCCCGTAAGCTTGGCAAAGGCTATCTCATAGATTTCAATCTTGCCAAGGATCTGCATCAGAAGCAAAGGAATATCACTTCAACCAAATACAGAAATTTTCCGAATGTCAATTTTTTGGAAGCTGCCAATCAACAGACAACCAATGCCTCCAGGCCGATTTTAGATCCTAAGGACAATAGAAGAAAGACTGGGGTGCAGTCAAAAACTAAAAATGACCGAGGTAGTGGGCAGGTAATGAAAAGTCAAGGTGCAGACGGCTCAGGAGTAACTTCAGCAAAAGATGTGACCAGCGCAAGAACATCACTTGAAAAGAGACTGAGTCTGGTAAAGCCAAGGAGGAAAGAGTTGATAAGCATCTTGCAAGAAACGTTGTTAGGTCCAAATCAAGAACCACCAAACACTCCTATGAGAAAGCGAGTTCCTGCTCCTCGTAATAAGATGGAGAGCGAGCATGTGTACATCTCTCCCATGCCTTTGAACTCAATTGCCATTGATGCCACTGATGCTGGATTTTTGAAGGGTAAAGGGAATGGAAAGCAGATAAGAGAAGGTTCTTGTGTGGGAACAAAAGGCTTTCGGGCTCCAGAGGTATTGTTCAGGTCTCCACATCAAGGTCCTAAGCTTGACATATGGTCTGCCGGTGTATCCTTGCTCTATCTCATAATTGGGAAAGTTCCTTTCACTGGCGATCCTGAACAGAACATAAAGGAGATAGCTAAACTGAGAGGCAGCGAGGATCTATGGGAAGTTGCTAAGCTACACAATCGGGAATCCTCATTCCCTGCGGACTTGTACGATAAACAAAATTTGCCATCTTTACGACTTCGAGATTGGTGCTTAAAGAACACTAAGAGACCAGAGTTCCTAGGAGCAATTCCCGGTACACTGTTTGATCTTTTGGACAAGTGCTTGATGGTGAACCCTAGAGTGAGAATCGGTGCAGAGGAAGCCCTTCAGCATGAGTTTTTTGCTCCATGCCATGAGAGCCTGAGGAAGGAGAGGCAATGTAAGAAGGAATTGTTGAGTTGA 2520 0.4357 MGSLIAGHTLDASTSSDSEIAWHFASLLLSLGHPLHPADLASRCTLFTASPQLVEFLCSIPQSPILLTSDFYVTLSAVAILAVGRFVSVTDCFGGSFVPRFGFRVSSLDVWGNRCGKRKRRFILDSDFLPVAKRGITFCSEHVNELDPIKMLPPCDDSSRIMLHSHGNLSTEMFGSPDECKEVQIEETSGSRTNVNDVVKDLKSTNMPTLVDDRINDNKVASNVRMGDDSMKPLPNIVQPLNDTVLEMPPKDDTGRIHDESCNYVNHLNGKSMAADTESMDLPTDSLSLQKFRQSSLNTNVIPSDANVPNTQNMSRNLHNEEKRNFSRGQASTSKGQKKNCTAMYFKEKRGTSTSACPEDQKERKDLPAFESYIVEEEVGSGAYGIVYKARRKNNGATVAIKCPHAKAHGQYVINELKVLERFGGKNFIIKYEGSIKNGNTDCFVLEHIEHDRPEVLKREIDIVQLRWYGYCMFRSLAALHKRGIIHRDVKPGNFLFSRKLGKGYLIDFNLAKDLHQKQRNITSTKYRNFPNVNFLEAANQQTTNASRPILDPKDNRRKTGVQSKTKNDRGSGQVMKSQGADGSGVTSAKDVTSARTSLEKRLSLVKPRRKELISILQETLLGPNQEPPNTPMRKRVPAPRNKMESEHVYISPMPLNSIAIDATDAGFLKGKGNGKQIREGSCVGTKGFRAPEVLFRSPHQGPKLDIWSAGVSLLYLIIGKVPFTGDPEQNIKEIAKLRGSEDLWEVAKLHNRESSFPADLYDKQNLPSLRLRDWCLKNTKRPEFLGAIPGTLFDLLDKCLMVNPRVRIGAEEALQHEFFAPCHESLRKERQCKKELLS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0384 839 MobiDBLite consensus disorder prediction 566 594 - -
Mibi10g0384 839 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 312 834 - -
Mibi10g0384 839 Gene3D Phosphorylase Kinase; domain 1 373 448 - -
Mibi10g0384 839 Gene3D Transferase(Phosphotransferase) domain 1 647 838 - -
Mibi10g0384 839 ProSiteProfiles Protein kinase domain profile. 373 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0384 839 MobiDBLite consensus disorder prediction 541 594 - -
Mibi10g0384 839 SMART serkin_6 373 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0384 839 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Mibi10g0384 839 SUPERFAMILY Protein kinase-like (PK-like) 369 827 IPR011009 -
Mibi10g0384 839 Pfam Protein kinase domain 373 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0384 839 Pfam Protein kinase domain 673 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g0384 839 MobiDBLite consensus disorder prediction 622 642 - -
Mibi10g0384 839 FunFam Kinase like protein 663 831 - -
Mibi10g0384 839 MobiDBLite consensus disorder prediction 551 565 - -
Mibi10g0384 839 FunFam Probable serine/threonine-protein kinase DDB_G0291918 365 528 - -
Mibi10g0384 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Mibi10g0384 839 Gene3D Transferase(Phosphotransferase) domain 1 449 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0384 Mibi-ChrMibi10 6185677 6191503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0384 666 820 Core Cell Cycle Gene Families AT3G48750 32.500 2.49e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Mibi10g0384 Pkinase 2.9e-17 CL0016