Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0380 ATGTCTTGCTCGTCGGAAAACTCGGAGATTTCTGACGTGAAGCCCGGAAAGTCGCCGGAGCAATCAACTTTCTCTCAGACTTGTAGCCTCTTGAGTCAGTATCTCAAGGAAAAGGGCAGTTTCGGAGATCTTAGTCTCGGAATGAAATGCAACATCAAAGGAACTACTGGGTCTCTTGAGACATCTGCAGCAATGAATAATAACCTTCTTCCAACCATGACTCCTATGAATCCCAGTGTGATGAATTCTGCGAGTAAGGAGCCTAAATCTGCGCAGTTGACCATGTTTTATGCTGGACAAGTTCTTGTGTTTGATGATTATCCAGCTGAGAAAGCCAAGGAGATCATGTCCATTGCAAGCAAAGGAATCTGCCAAACTCAGAACAGATCTGCTTATACTTACCCTTCATTTACTCCTAATTTGGTCACAATTTCTGCTGATTCCAATGCTGCCTGCAATTTGGCTCAAGAGCACTCTCCAGCACAACCCAGACCTGTCATCGCTGATCTGCCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGCGAAGAGGAAGGATAGAATCGCTGCCAGAGCTCCATATCAAACAAACGATGCCAAGAAGCCAGCTGAAGGCATGCCATGGATGGCCTTGTCTCCTAATTCACCACAAGTCTGA 660 0.4576 MSCSSENSEISDVKPGKSPEQSTFSQTCSLLSQYLKEKGSFGDLSLGMKCNIKGTTGSLETSAAMNNNLLPTMTPMNPSVMNSASKEPKSAQLTMFYAGQVLVFDDYPAEKAKEIMSIASKGICQTQNRSAYTYPSFTPNLVTISADSNAACNLAQEHSPAQPRPVIADLPIARKASLHRFLAKRKDRIAARAPYQTNDAKKPAEGMPWMALSPNSPQV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0380 219 SMART tify_2 86 121 IPR010399 -
Mibi10g0380 219 MobiDBLite consensus disorder prediction 1 23 - -
Mibi10g0380 219 Pfam tify domain 87 120 IPR010399 -
Mibi10g0380 219 Pfam Jas motif 171 196 IPR018467 -
Mibi10g0380 219 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 202 IPR040390 -
Mibi10g0380 219 MobiDBLite consensus disorder prediction 198 219 - -
Mibi10g0380 219 ProSiteProfiles Tify domain profile. 86 121 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0380 Mibi-ChrMibi10 6101870 6103365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0380 1 213 Tify Gene Family AT1G19180 40.467 8.34e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mibi10g0380 tify 2.7e-17 No_clan